RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, human

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD3-211	ENST00000472673	NAPRT	Q6XQN6	538 aa		4.64	□□□□□ -1.67
COMMD3-211	ENST00000472673	PARS2	Q7L3T8	475 aa	Known RBP	4.64	□□□□□ -1.67
COMMD3-211	ENST00000472673	ABRA	Q8N0Z2	381 aa		4.64	□□□□□ -1.67
COMMD3-211	ENST00000472673	FAM156A	Q8NDB6	213 aa		4.64	□□□□□ -1.67
COMMD3-211	ENST00000472673	OR56A3	Q8NH54	315 aa		4.64	□□□□□ -1.67
COMMD3-211	ENST00000472673	RP9	Q8TA86	221 aa	Known RBP	4.64	□□□□□ -1.67
COMMD3-211	ENST00000472673	SOCS4	Q8WXH5	440 aa		4.64	□□□□□ -1.67
COMMD3-211	ENST00000472673	DPF1	Q92782	380 aa		4.64	□□□□□ -1.67
COMMD3-211	ENST00000472673	ADAMTS5	Q9UNA0	930 aa		4.64	□□□□□ -1.67
COMMD3-211	ENST00000472673	PAXBP1	Q9Y5B6	917 aa		4.64	□□□□□ -1.67
COMMD3-211	ENST00000472673	SNX14	Q9Y5W7	946 aa		4.64	□□□□□ -1.67
COMMD3-211	ENST00000472673	TRIM43B	A6NCK2	446 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	WIPF3	A6NGB9	483 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	ISM1	B1AKI9	464 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	SMIM22	K7EJ46	135 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	TPP1	O14773	563 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	FRS3	O43559	492 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	RASSF9	O75901	435 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	PRKCG	P05129	697 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	NPS	P0C0P6	89 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	CNGA2	Q16280	664 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	LY6K	Q17RY6	165 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	PTCHD3	Q3KNS1	767 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	C3orf38	Q5JPI3	329 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	RNF220	Q5VTB9	566 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	SLC9A4	Q6AI14	798 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	DARS2	Q6PI48	645 aa	Known RBP	4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673		Q6ZWC4	215 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	SRGAP1	Q7Z6B7	1085 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	C14orf80	Q86SX3	495 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	MICU3	Q86XE3	530 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	WDR75	Q8IWA0	830 aa	Known RBP	4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	SRRM1	Q8IYB3	904 aa	Known RBP	4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	IZUMO1	Q8IYV9	350 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	SPART	Q8N0X7	666 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	LRTOMT	Q8WZ04	291 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	DDB2	Q92466	427 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	SPSB4	Q96A44	273 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	REPS1	Q96D71	796 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	DPCD	Q9BVM2	203 aa	Predicted RBP	4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	FSD1L	Q9BXM9	530 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	STK31	Q9BXU1	1019 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	GBA2	Q9HCG7	927 aa	Predicted RBP	4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	KLHL42	Q9P2K6	505 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	OGDHL	Q9ULD0	1010 aa		4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.63	□□□□□ -1.67
COMMD3-211	ENST00000472673	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	MBD3L3	A6NE82	208 aa	Predicted RBP	4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	LINC01548	A6NM66	108 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	PYCARD-AS1	I3L0S3	204 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	PDE8B	O95263	885 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	MAP4K4	O95819	1239 aa	Predicted RBP	4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	ZBED1	O96006	694 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	DLD	P09622	509 aa	Known RBP	4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	CTGF	P29279	349 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	CYP4F2	P78329	520 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	FMO1	Q01740	532 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	TFF2	Q03403	129 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	SLC10A2	Q12908	348 aa	Predicted RBP	4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	FOXF2	Q12947	444 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	GRM1	Q13255	1194 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	CERCAM	Q5T4B2	595 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	CACHD1	Q5VU97	1274 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	DPY19L3	Q6ZPD9	716 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	CHST15	Q7LFX5	561 aa	Predicted RBP	4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	CAND1	Q86VP6	1230 aa	Known RBP	4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	ABHD11	Q8NFV4	315 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	SEMA6D	Q8NFY4	1073 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	TTC8	Q8TAM2	541 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	DNAJB14	Q8TBM8	379 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	NMD3	Q96D46	503 aa	Known RBP	4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	PPP1R9B	Q96SB3	815 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	MACROD1	Q9BQ69	325 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	C17orf80	Q9BSJ5	609 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	LRRC27	Q9C0I9	530 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	BHMT2	Q9H2M3	363 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	ZNF287	Q9HBT7	754 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	OBP2A	Q9NY56	170 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	AFF4	Q9UHB7	1163 aa	Known RBP	4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	CDY1	Q9Y6F8	540 aa		4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.62	□□□□□ -1.67
COMMD3-211	ENST00000472673	CGB1	A6NKQ9	187 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	GOLIM4	O00461	696 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	PPM1G	O15355	546 aa	Predicted RBP	4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	MGEA5	O60502	916 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	SRGAP2	O75044	1071 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	RASAL1	O95294	804 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	CDK4	P11802	303 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	ATF3	P18847	181 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	KLRC1	P26715	233 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	PRKAR1B	P31321	381 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	ABCG1	P45844	678 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	ITGA8	P53708	1063 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	RPS16	P62249	146 aa	Known RBP	4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	FAM193A	P78312	1265 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	CCNI	Q14094	377 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	GBX1	Q14549	363 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	POLD3	Q15054	466 aa	Predicted RBP	4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	INSC	Q1MX18	579 aa		4.61	□□□□□ -1.67

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