RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 ACOT1Q86TX2 421 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 SPATA2LQ8IUW3 424 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-204ENST00000471812 ZC3H3Q8IXZ2 948 aaKnown RBP10.07□□□□□ -0.8
GGPS1-204ENST00000471812 CCDC105Q8IYK2 499 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 ADSSL1Q8N142 457 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 MAB21L3Q8N8X9 362 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 C12orf29Q8N999 325 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 ZMIZ2Q8NF64 920 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 GOLGA5Q8TBA6 731 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 WHAMMQ8TF30 809 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 ELSPBP1Q96BH3 223 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 KCNK16Q96T55 309 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 MFSD1Q9H3U5 465 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 ZFP14Q9HCL3 533 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 WNT16Q9UBV4 365 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 CDH9Q9ULB4 789 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 MAFFQ9ULX9 164 aa10.07□□□□□ -0.8
GGPS1-204ENST00000471812 ZFP37Q9Y6Q3 630 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-204ENST00000471812 KIAA1549LQ6ZVL6 1849 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 GOLGA6L4A6NEF3 574 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 ZNF197O14709 1029 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 MICAL2O94851 1124 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 STAU1O95793 577 aaKnown RBP10.06□□□□□ -0.8
GGPS1-204ENST00000471812 PAX3P23760 479 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 PIK3CAP42336 1068 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 TUFMP49411 452 aaKnown RBP10.06□□□□□ -0.8
GGPS1-204ENST00000471812 NDST1P52848 882 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 STX17P56962 302 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 TNNC1P63316 161 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 CAMK4Q16566 473 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 NFE2Q16621 373 aaPredicted RBP10.06□□□□□ -0.8
GGPS1-204ENST00000471812 ZNF667Q5HYK9 610 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 TRIM68Q6AZZ1 485 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 KLHL10Q6JEL2 608 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 TPRG1Q6ZUI0 275 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 DPH6Q7L8W6 267 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 GPRIN1Q7Z2K8 1008 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 MAML2Q8IZL2 1156 aaPredicted RBP10.06□□□□□ -0.8
GGPS1-204ENST00000471812 FUKQ8N0W3 1084 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 B3GALNT2Q8NCR0 500 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 MYCBPAPQ8TBZ2 947 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 USP13Q92995 863 aaPredicted RBP10.06□□□□□ -0.8
GGPS1-204ENST00000471812 SMARCE1Q969G3 411 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 WBP2Q969T9 261 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 NXPE3Q969Y0 559 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 TIGD1Q96MW7 591 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 DDX23Q9BUQ8 820 aaKnown RBP10.06□□□□□ -0.8
GGPS1-204ENST00000471812 ELOVL4Q9GZR5 314 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 SNX25Q9H3E2 840 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 VRTNQ9H8Y1 702 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 TRPV4Q9HBA0 871 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 FAM49BQ9NUQ9 324 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 C2orf42Q9NWW7 574 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 HSFX1Q9UBD0 423 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 CTNND2Q9UQB3 1225 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 EP300Q09472 2414 aaPredicted RBP10.06□□□□□ -0.8
GGPS1-204ENST00000471812 FAM186AA6NE01 2351 aa10.06□□□□□ -0.8
GGPS1-204ENST00000471812 A8MXQ7 604 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 AP1G2O75843 785 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 CLSTN1O94985 981 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 ARSAP15289 507 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 PCSK1P29120 753 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 CLCN5P51795 746 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 STARD6P59095 220 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 MCCD1P59942 119 aaPredicted RBP10.05□□□□□ -0.8
GGPS1-204ENST00000471812 NOP14P78316 857 aaKnown RBP10.05□□□□□ -0.8
GGPS1-204ENST00000471812 IFRD2Q12894 506 aaPredicted RBP10.05□□□□□ -0.8
GGPS1-204ENST00000471812 MORC3Q14149 939 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 EDRF1Q3B7T1 1238 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 CFAP221Q4G0U5 840 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 TTI2Q6NXR4 508 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 FAM35AQ86V20 835 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 ALYREFQ86V81 257 aaKnown RBP10.05□□□□□ -0.8
GGPS1-204ENST00000471812 MFSD6LQ8IWD5 586 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 DTWD2Q8NBA8 298 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 PJA1Q8NG27 643 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 SCAMP5Q8TAC9 235 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 C2orf15Q8WU43 125 aaKnown RBP10.05□□□□□ -0.8
GGPS1-204ENST00000471812 KAT5Q92993 513 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 SYAP1Q96A49 352 aaPredicted RBP10.05□□□□□ -0.8
GGPS1-204ENST00000471812 FAM122AQ96E09 287 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 SMOQ99835 787 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 BCO2Q9BYV7 579 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 TASP1Q9H6P5 420 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 BRD9Q9H8M2 597 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 TRPC7Q9HCX4 862 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 ABCB6Q9NP58 842 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 HPS4Q9NQG7 708 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 RBM12Q9NTZ6 932 aaKnown RBP10.05□□□□□ -0.8
GGPS1-204ENST00000471812 POLR3BQ9NW08 1133 aaPredicted RBP10.05□□□□□ -0.8
GGPS1-204ENST00000471812 GTSE1Q9NYZ3 720 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 CHMP5Q9NZZ3 219 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 MAGEC2Q9UBF1 373 aaPredicted RBP10.05□□□□□ -0.8
GGPS1-204ENST00000471812 NDRG2Q9UN36 371 aaKnown RBP10.05□□□□□ -0.8
GGPS1-204ENST00000471812 FRMD4BQ9Y2L6 1034 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 ASB3Q9Y575 518 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 SDK1Q7Z5N4 2213 aa10.05□□□□□ -0.8
GGPS1-204ENST00000471812 GVINP1Q7Z2Y8 2422 aa10.04□□□□□ -0.8
GGPS1-204ENST00000471812 PTPRZ1P23471 2315 aaPredicted RBP10.04□□□□□ -0.8
GGPS1-204ENST00000471812 MAPK13O15264 365 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms