RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TMEM86AQ8N2M4 240 aa8.63□□□□□ -1.03
USP48-207ENST00000471752 XXYLT1Q8NBI6 393 aa8.63□□□□□ -1.03
USP48-207ENST00000471752 OR6B3Q8NGW1 331 aa8.63□□□□□ -1.03
USP48-207ENST00000471752 MYCBPAPQ8TBZ2 947 aa8.63□□□□□ -1.03
USP48-207ENST00000471752 LEO1Q8WVC0 666 aaPredicted RBP8.63□□□□□ -1.03
USP48-207ENST00000471752 EEF2KMTQ96G04 330 aa8.63□□□□□ -1.03
USP48-207ENST00000471752 P2RY11Q96G91 374 aa8.63□□□□□ -1.03
USP48-207ENST00000471752 KCTD10Q9H3F6 313 aa8.63□□□□□ -1.03
USP48-207ENST00000471752 ECT2Q9H8V3 914 aa8.63□□□□□ -1.03
USP48-207ENST00000471752 GDPD2Q9HCC8 539 aa8.63□□□□□ -1.03
USP48-207ENST00000471752 SMPD4Q9NXE4 827 aa8.63□□□□□ -1.03
USP48-207ENST00000471752 NCDNQ9UBB6 729 aa8.63□□□□□ -1.03
USP48-207ENST00000471752 MAGEC2Q9UBF1 373 aaPredicted RBP8.63□□□□□ -1.03
USP48-207ENST00000471752 MAPK8IP1Q9UQF2 711 aa8.63□□□□□ -1.03
USP48-207ENST00000471752 ZFHX4Q86UP3 3567 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 ZNF840PA6NDX5 716 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 TRIM24O15164 1050 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 AXIN1O15169 862 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 FGF19O95750 216 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 TBX18O95935 607 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 CKMP06732 381 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 SLFN14P0C7P3 912 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 CHRM1P11229 460 aaPredicted RBP8.62□□□□□ -1.03
USP48-207ENST00000471752 PFKFB1P16118 471 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 HDCP19113 662 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 OPRD1P41143 372 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 MAGEA9P43362 315 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 MAGEA11P43364 429 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 CCR3P51677 355 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 NDUFA8P51970 172 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 RPL10AP62906 217 aaKnown RBP8.62□□□□□ -1.03
USP48-207ENST00000471752 SMARCB1Q12824 385 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 TAF10Q12962 218 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 MYO1EQ12965 1108 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 SIM2Q14190 667 aaPredicted RBP8.62□□□□□ -1.03
USP48-207ENST00000471752 MTF1Q14872 753 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 KNOP1Q1ED39 458 aaKnown RBP8.62□□□□□ -1.03
USP48-207ENST00000471752 HS2ST1Q7LGA3 356 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 KBTBD6Q86V97 674 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 C12orf40Q86WS4 652 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 FRMD1Q8N878 549 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 C12orf29Q8N999 325 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 ZMIZ2Q8NF64 920 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 PARD3BQ8TEW8 1205 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 OSCP1Q8WVF1 389 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 MRPS31Q92665 395 aaKnown RBP8.62□□□□□ -1.03
USP48-207ENST00000471752 ERLEC1Q96DZ1 483 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 TRMT2BQ96GJ1 504 aaKnown RBP8.62□□□□□ -1.03
USP48-207ENST00000471752 HHIPQ96QV1 700 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 TWNKQ96RR1 684 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 SNX25Q9H3E2 840 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 APOBEC3GQ9HC16 384 aaKnown RBP8.62□□□□□ -1.03
USP48-207ENST00000471752 ABCB6Q9NP58 842 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 DUS2Q9NX74 493 aaKnown RBP8.62□□□□□ -1.03
USP48-207ENST00000471752 HCN2Q9UL51 889 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 CDH9Q9ULB4 789 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 USP18Q9UMW8 372 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 HPSEQ9Y251 543 aa8.62□□□□□ -1.03
USP48-207ENST00000471752 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.62□□□□□ -1.03
USP48-207ENST00000471752 KIF26AQ9ULI4 1882 aaPredicted RBP8.62□□□□□ -1.03
USP48-207ENST00000471752 CFAP47Q6ZTR5 3102 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 GON4LQ3T8J9 2241 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 USP24Q9UPU5 2620 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 PVALEFA0A1B0GWK0 134 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 A8MXQ7 604 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 K7EQS6 105 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 LEFTY2O00292 366 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 TNFRSF10BO14763 440 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 EXOC3O60645 756 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 TACC1O75410 805 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 ABL1P00519 1130 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 CCDC130P13994 396 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 PCSK1P29120 753 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 SEC13P55735 322 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 PLCB2Q00722 1185 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 AMPD3Q01432 767 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 FAM160A1Q05DH4 1040 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 USP4Q13107 963 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 ZNF268Q14587 947 aaPredicted RBP8.61□□□□□ -1.03
USP48-207ENST00000471752 GSE1Q14687 1217 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 SF3A2Q15428 464 aaKnown RBP8.61□□□□□ -1.03
USP48-207ENST00000471752 DGKKQ5KSL6 1271 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 RHBDF2Q6PJF5 856 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 DENND5BQ6ZUT9 1274 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 DPH6Q7L8W6 267 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 GPRIN1Q7Z2K8 1008 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 DGLUCYQ7Z3D6 616 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 FILIP1Q7Z7B0 1213 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 ACOT1Q86TX2 421 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 LONP2Q86WA8 852 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 HSCBQ8IWL3 235 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 SMYD4Q8IYR2 804 aaPredicted RBP8.61□□□□□ -1.03
USP48-207ENST00000471752 ADGRG2Q8IZP9 1017 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 FAM160A2Q8N612 972 aaPredicted RBP8.61□□□□□ -1.03
USP48-207ENST00000471752 ERCC4Q92889 916 aaPredicted RBP8.61□□□□□ -1.03
USP48-207ENST00000471752 ZFRQ96KR1 1074 aaKnown RBP8.61□□□□□ -1.03
USP48-207ENST00000471752 SPATA17Q96L03 361 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 GCNAQ96QF7 691 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 SMOQ99835 787 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 P2RY13Q9BPV8 354 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms