RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CASP4P49662 377 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 TERF1P54274 439 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 RUNX3Q13761 415 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 NCOA4Q13772 614 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 PDGFRLQ15198 375 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 SGSM1Q2NKQ1 1148 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 ZNF699Q32M78 642 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 ZACNQ401N2 412 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 ZNF667Q5HYK9 610 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 GUF1Q8N442 669 aaKnown RBP14.38□□□□□ -0.11
HMGN1-211ENST00000471260 SPEM1Q8N4L4 309 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 KIAA1958Q8N8K9 716 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 B3GALNT2Q8NCR0 500 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 PLEKHO2Q8TD55 490 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 EXOC4Q96A65 974 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 ZFYVE19Q96K21 471 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 TNIP3Q96KP6 325 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 TTLL2Q9BWV7 592 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 ELOVL4Q9GZR5 314 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 SMG9Q9H0W8 520 aaKnown RBP14.38□□□□□ -0.11
HMGN1-211ENST00000471260 CCL26Q9Y258 94 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 ZNF638Q14966 1978 aaKnown RBP14.37□□□□□ -0.11
HMGN1-211ENST00000471260 PAPSS2O95340 614 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-211ENST00000471260 MSNP26038 577 aaKnown RBP14.37□□□□□ -0.11
HMGN1-211ENST00000471260 RPL13P26373 211 aaKnown RBP14.37□□□□□ -0.11
HMGN1-211ENST00000471260 CXCL12P48061 93 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 SOX9P48436 509 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 TNK2Q07912 1038 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 CCDC142Q17RM4 750 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 MDH1BQ5I0G3 518 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 CEP135Q66GS9 1140 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 INTS8Q75QN2 995 aaKnown RBP14.37□□□□□ -0.11
HMGN1-211ENST00000471260 SUMF1Q8NBK3 374 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 STKLD1Q8NE28 680 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 RUBCNQ92622 972 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 CHAMP1Q96JM3 812 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 RBSNQ9H1K0 784 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 TRPM5Q9NZQ8 1165 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 GCNT4Q9P109 453 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 NME7Q9Y5B8 376 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 OBSL1O75147 1896 aa14.37□□□□□ -0.11
HMGN1-211ENST00000471260 VPS13AQ96RL7 3174 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 KIF26AQ9ULI4 1882 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-211ENST00000471260 SYCE3A1L190 88 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 F8VP50 259 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 CKMP06732 381 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 HDCP19113 662 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 CCINQ13939 588 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 MTF1Q14872 753 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 ZNF77Q15935 545 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 TXNDC11Q6PKC3 985 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 SV2AQ7L0J3 742 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 TRPC7Q9HCX4 862 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 HPS4Q9NQG7 708 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 ARHGAP26Q9UNA1 814 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 PTPRDP23468 1912 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 ATP8B3O60423 1300 aa14.36□□□□□ -0.11
HMGN1-211ENST00000471260 GREB1Q4ZG55 1949 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 TRDMT1O14717 391 aaKnown RBP14.35□□□□□ -0.11
HMGN1-211ENST00000471260 RTN3O95197 1032 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-211ENST00000471260 VNN1O95497 513 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 PRR29P0C7W0 189 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 TDGF1P13385 188 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 TRIM21P19474 475 aaKnown RBP14.35□□□□□ -0.11
HMGN1-211ENST00000471260 NR2F2P24468 414 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 HOXA6P31267 233 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 VAMP7P51809 220 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 MCCD1P59942 119 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-211ENST00000471260 DLG4P78352 724 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 GRSF1Q12849 480 aaKnown RBP eCLIP14.35□□□□□ -0.11
HMGN1-211ENST00000471260 USP4Q13107 963 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 GAS6Q14393 721 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 PON2Q15165 354 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 TMEM196Q5HYL7 178 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 UNC93AQ86WB7 457 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 NUP93Q8N1F7 819 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 CPA6Q8N4T0 437 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 ARL14EPQ8N8R7 260 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-211ENST00000471260 TTC8Q8TAM2 541 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 OSCP1Q8WVF1 389 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 OVCA2Q8WZ82 227 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 ATP2A3Q93084 1043 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 SLITRK1Q96PX8 696 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 CYP2S1Q96SQ9 504 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 EPC1Q9H2F5 836 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 GOLPH3LQ9H4A5 285 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 DPEP3Q9H4B8 488 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 EBF3Q9H4W6 596 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 COMMD8Q9NX08 183 aa14.35□□□□□ -0.11
HMGN1-211ENST00000471260 ZNF840PA6NDX5 716 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 GOLGA6L4A6NEF3 574 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 ZNF500O60304 480 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-211ENST00000471260 AKAP3O75969 853 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 CLSTN1O94985 981 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 ASS1P00966 412 aaKnown RBP14.34□□□□□ -0.11
HMGN1-211ENST00000471260 TPM2P07951 284 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 KRT13P13646 458 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 CNR2P34972 360 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 PSMC2P35998 433 aaKnown RBP14.34□□□□□ -0.11
HMGN1-211ENST00000471260 CDH8P55286 799 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms