RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 MLC1Q15049 377 aa6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 MINDY4Q4G0A6 757 aa6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 TEDDM1Q5T9Z0 273 aa6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 SLC9A4Q6AI14 798 aa6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 CEP85Q6P2H3 762 aa6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 NAPRTQ6XQN6 538 aa6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 PARS2Q7L3T8 475 aaKnown RBP6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 PTF1AQ7RTS3 328 aa6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 WDR53Q7Z5U6 358 aaPredicted RBP6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 PPP2R3CQ969Q6 453 aa6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 DNMT3BQ9UBC3 853 aaKnown RBP6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 ADAMTS5Q9UNA0 930 aa6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 TRIM43BA6NCK2 446 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 PDE8BO95263 885 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 PDE6CP51160 858 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 NPY5RQ15761 445 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 C3orf38Q5JPI3 329 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 PCID2Q5JVF3 399 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 LRCH2Q5VUJ6 765 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 CHST15Q7LFX5 561 aaPredicted RBP6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 C1QL2Q7Z5L3 287 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 TICAM2Q86XR7 235 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 SLC15A3Q8IY34 581 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 IZUMO1Q8IYV9 350 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 FAM156AQ8NDB6 213 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 RP9Q8TA86 221 aaKnown RBP6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 TRIM43Q96BQ3 446 aaPredicted RBP6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 XPNPEP3Q9NQH7 507 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 C1orf112Q9NSG2 853 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 FLRT1Q9NZU1 646 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 SH3BP4Q9P0V3 963 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 COL20A1Q9P218 1284 aa6.15□□□□□ -1.42
PRPF40A-206ENST00000471167 FAM227AF5H4B4 570 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 MYO1CO00159 1063 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 ADAMTS3O15072 1205 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 FRS3O43559 492 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 JTBO76095 146 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 IL1R1P14778 569 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 SFPQP23246 707 aaKnown RBP eCLIP6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 FMO1Q01740 532 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 RNASE12Q5GAN4 147 aaKnown RBP6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 SESTD1Q86VW0 696 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 CHSY1Q86X52 802 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 LRRC71Q8N4P6 559 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 OSCP1Q8WVF1 389 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 XAGE5Q8WWM1 108 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 CTHRC1Q96CG8 243 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 ZNF778Q96MU6 729 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 PRR25Q96S07 402 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 C17orf80Q9BSJ5 609 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 ZNF518BQ9C0D4 1074 aa6.14□□□□□ -1.43
PRPF40A-206ENST00000471167 CFAP69A5D8W1 941 aa6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 TBC1D4O60343 1298 aa6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 FPR3P25089 353 aa6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 PDE1AP54750 535 aa6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 PSG6Q00889 435 aa6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 KRT17Q04695 432 aa6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 MGAT5BQ3V5L5 792 aa6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 ARHGAP29Q52LW3 1261 aa6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 PAPD7Q5XG87 772 aaKnown RBP6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 SLC29A4Q7RTT9 530 aa6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 C14orf80Q86SX3 495 aa6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 CAND1Q86VP6 1230 aaKnown RBP6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 MPP5Q8N3R9 675 aa6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 FANCBQ8NB91 859 aa6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 CYP2W1Q8TAV3 490 aa6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 NMD3Q96D46 503 aaKnown RBP6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 AS3MTQ9HBK9 375 aa6.13□□□□□ -1.43
PRPF40A-206ENST00000471167 TCRBV5S1A1TA0A578 114 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 VSTM5A8MXK1 200 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 PRRT4C9JH25 899 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 SMIM22K7EJ46 135 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 AGPSO00116 658 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 QSOX1O00391 747 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 TPP1O14773 563 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 HRGP04196 525 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 XRCC6P12956 609 aaKnown RBP eCLIP6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 E2F1Q01094 437 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 CNGA2Q16280 664 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 CEP78Q5JTW2 689 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 PRAMEF17Q5VTA0 474 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 FCRL6Q6DN72 434 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 VGLL2Q8N8G2 317 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 DNAJB14Q8TBM8 379 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 RITA1Q96K30 269 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 SH2D3AQ9BRG2 576 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 QTRT1Q9BXR0 403 aaKnown RBP6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 KRTAP9-8Q9BYQ0 159 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 TRIM5Q9C035 493 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 A1CFQ9NQ94 594 aaKnown RBP6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 SACM1LQ9NTJ5 587 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 ASIC5Q9NY37 505 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 CDY1Q9Y6F8 540 aa6.12□□□□□ -1.43
PRPF40A-206ENST00000471167 WDR91A4D1P6 747 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 ISM1B1AKI9 464 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 H7C4K7 107 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 PYCARD-AS1I3L0S3 204 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 AP4M1O00189 453 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 MYF5P13349 255 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 MPGP29372 298 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms