RNA–Protein interactions for RNA: ENST00000470434.1

SBF1-205, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 2,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-205	ENST00000470434	OTUD4	Q01804	1114 aa	Known RBP	19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	TAF11	Q15544	211 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	C3orf62	Q6ZUJ4	267 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	IFNL1	Q8IU54	200 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	WDR49	Q8IV35	697 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	ENDOV	Q8N8Q3	282 aa	Known RBP	19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	TTC13	Q8NBP0	860 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	WDR83	Q9BRX9	315 aa	Known RBP	19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	CISH	Q9NSE2	258 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	SAE1	Q9UBE0	346 aa	Predicted RBP	19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	RPL26L1	Q9UNX3	145 aa	Known RBP	19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	HNRNPCL1	O60812	293 aa	Known RBP	19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	LUC7L3	O95232	432 aa	Known RBP	19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	TROVE2	P10155	538 aa	Known RBP eCLIP	19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	PTPN4	P29074	926 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	SLC25A11	Q02978	314 aa	Known RBP	19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	CTC1	Q2NKJ3	1217 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	PLEKHG4	Q58EX7	1191 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	CYP4A22	Q5TCH4	519 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	CLNK	Q7Z7G1	428 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	RHPN2	Q8IUC4	686 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	TCP10L	Q8TDR4	215 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	SH3TC2	Q8TF17	1288 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	SLC7A3	Q8WY07	619 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	ALKBH8	Q96BT7	664 aa	Known RBP	19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	ZNF302	Q9NR11	478 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	LRRC42	Q9Y546	428 aa		19.9	■□□□□ 0.78
SBF1-205	ENST00000470434	HARS	P12081	509 aa	Known RBP	19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	PSMC4	P43686	418 aa		19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	DYNLT1	P63172	113 aa		19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	RNASEL	Q05823	741 aa	Known RBP	19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	SEPT7	Q16181	437 aa	Known RBP	19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	ZNF394	Q53GI3	561 aa		19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	BBS12	Q6ZW61	710 aa		19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	MTDH	Q86UE4	582 aa	Known RBP	19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	BANP	Q8N9N5	519 aa		19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	FBXO36	Q8NEA4	188 aa		19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	DCAKD	Q8WVC6	231 aa		19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	NAF1	Q96HR8	494 aa	Known RBP	19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	NIF3L1	Q9GZT8	377 aa		19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	VPS11	Q9H270	941 aa		19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	ZNF214	Q9UL59	606 aa	Predicted RBP	19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	MGAM	O43451	1857 aa		19.89	■□□□□ 0.77
SBF1-205	ENST00000470434		A0A0G2JMZ2	1700 aa		19.89	■□□□□ 0.77
SBF1-205	ENST00000470434	CST8	O60676	142 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	ATG7	O95352	703 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	RPL22	P35268	128 aa	Known RBP	19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	MYL6	P60660	151 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	C1QTNF8	P60827	252 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	SP2	Q02086	613 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	BLMH	Q13867	455 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	TAZ	Q16635	292 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	TFAP2B	Q92481	460 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	NUDCD1	Q96RS6	583 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	C10orf88	Q9H8K7	445 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	KANSL3	Q9P2N6	904 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	STRIP2	Q9ULQ0	834 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	FAM189A1	O60320	539 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	SMNDC1	O75940	238 aa	Known RBP eCLIP	19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	KRT7	P08729	469 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	CYP2C8	P10632	490 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	PSMA2	P25787	234 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	RFC1	P35251	1148 aa	Predicted RBP	19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	TNFSF9	P41273	254 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	GCLC	P48506	637 aa	Predicted RBP	19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	NIFK	Q9BYG3	293 aa	Known RBP	19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	MTMR12	Q9C0I1	747 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	NUMBL	Q9Y6R0	609 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	ANK1	P16157	1881 aa		19.88	■□□□□ 0.77
SBF1-205	ENST00000470434	SMAP	O00193	183 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	LRCH4	O75427	683 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	TSHR	P16473	764 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	CDC25C	P30307	473 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	RAD23B	P54727	409 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	CAPS	Q13938	189 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	TMEM132B	Q14DG7	1078 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	SGSM1	Q2NKQ1	1148 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	SMTNL2	Q2TAL5	461 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	ZPBP2	Q6X784	338 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	PALM2	Q8IXS6	379 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	ARFGAP1	Q8N6T3	406 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	RSAD2	Q8WXG1	361 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	ZIC5	Q96T25	663 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	TEX13B	Q9BXU2	312 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	ZWILCH	Q9H900	591 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	WDR91	A4D1P6	747 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	SIGLEC16	A6NMB1	481 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	ADCY3	O60266	1144 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	PIAS1	O75925	651 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	TMEM63A	O94886	807 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	KDELR1	P24390	212 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	IL1R2	P27930	398 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	THNSL1	Q8IYQ7	743 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	RFWD2	Q8NHY2	731 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	DENND2D	Q9H6A0	471 aa	Predicted RBP	19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	MANSC1	Q9H8J5	431 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	SLC17A7	Q9P2U7	560 aa		19.87	■□□□□ 0.77
SBF1-205	ENST00000470434	TCRBV7S3A2	A0A539	114 aa		19.86	■□□□□ 0.77
SBF1-205	ENST00000470434	TTLL13P	A6NNM8	815 aa		19.86	■□□□□ 0.77
SBF1-205	ENST00000470434	AOC2	O75106	756 aa		19.86	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms