RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 SLC39A14Q15043 492 aa13.53□□□□□ -0.24
GAPVD1-214ENST00000469528 C2orf27AQ580R0 203 aa13.53□□□□□ -0.24
GAPVD1-214ENST00000469528 HS2ST1Q7LGA3 356 aa13.53□□□□□ -0.24
GAPVD1-214ENST00000469528 LIMS2Q7Z4I7 341 aa13.53□□□□□ -0.24
GAPVD1-214ENST00000469528 WDR49Q8IV35 697 aa13.53□□□□□ -0.24
GAPVD1-214ENST00000469528 USP33Q8TEY7 942 aa13.53□□□□□ -0.24
GAPVD1-214ENST00000469528 C8orf48Q96LL4 319 aa13.53□□□□□ -0.24
GAPVD1-214ENST00000469528 CLIC6Q96NY7 704 aa13.53□□□□□ -0.24
GAPVD1-214ENST00000469528 SLC22A12Q96S37 553 aa13.53□□□□□ -0.24
GAPVD1-214ENST00000469528 PNKPQ96T60 521 aa13.53□□□□□ -0.24
GAPVD1-214ENST00000469528 EDEM2Q9BV94 578 aa13.53□□□□□ -0.24
GAPVD1-214ENST00000469528 CUEDC2Q9H467 287 aa13.53□□□□□ -0.24
GAPVD1-214ENST00000469528 POLMQ9NP87 494 aaPredicted RBP13.53□□□□□ -0.24
GAPVD1-214ENST00000469528 SIX4Q9UIU6 781 aa13.53□□□□□ -0.24
GAPVD1-214ENST00000469528 ATG2BQ96BY7 2078 aa13.52□□□□□ -0.24
GAPVD1-214ENST00000469528 ZNF840PA6NDX5 716 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 K7EQS6 105 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 ZBTB24O43167 697 aaPredicted RBP13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 TACC1O75410 805 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 ABL1P00519 1130 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 APODP05090 189 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 TNNI1P19237 187 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 LMO2P25791 158 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 HOXC13P31276 330 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 EIF2DP41214 584 aaKnown RBP13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 CASP5P51878 434 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 CEBPZQ03701 1054 aaKnown RBP13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 LMAN2Q12907 356 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 SPDYCQ5MJ68 293 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 OSTM1Q86WC4 334 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 ZSWIM2Q8NEG5 633 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 PDZD8Q8NEN9 1154 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 OR6B3Q8NGW1 331 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 RIN3Q8TB24 985 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 KCNV2Q8TDN2 545 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 SPACA7Q96KW9 195 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 CNOT6LQ96LI5 555 aaKnown RBP13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 TTLL2Q9BWV7 592 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 TNMDQ9H2S6 317 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 RXFP3Q9NSD7 469 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 MMP17Q9ULZ9 603 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 TSC2P49815 1807 aa13.52□□□□□ -0.25
GAPVD1-214ENST00000469528 KMT2BQ9UMN6 2715 aaPredicted RBP13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 CNOT1A5YKK6 2376 aaKnown RBP13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 A0A0A0MRY4 1105 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 C4orf47A7E2U8 309 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 DCLK1O15075 740 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 ATP2C2O75185 946 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 RTN3O95197 1032 aaPredicted RBP13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 ADH1CP00326 375 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 CEACAM1P13688 526 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 TNFRSF4P43489 277 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 NOVA1P51513 510 aaKnown RBP13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 SEC13P55735 322 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 WNT7BP56706 349 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 TNNC1P63316 161 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 TRPC3Q13507 836 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 CUL4AQ13619 759 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 CRY1Q16526 586 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 EOGTQ5NDL2 527 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 BTBD8Q5XKL5 378 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 PMS2CLQ68D20 193 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 PSAPL1Q6NUJ1 521 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 LPCAT2Q7L5N7 544 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 TRAPPC11Q7Z392 1133 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 CYP2U1Q7Z449 544 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 RASSF3Q86WH2 238 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 KBTBD7Q8WVZ9 684 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 OVCA2Q8WZ82 227 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 MYLPFQ96A32 169 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 OTUB2Q96DC9 234 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 PCED1BQ96HM7 432 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 NUSAP1Q9BXS6 441 aaKnown RBP13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 ELOVL4Q9GZR5 314 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 TMEM9BQ9NQ34 198 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 HSPBP1Q9NZL4 362 aa13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 CGNQ9P2M7 1197 aaKnown RBP13.51□□□□□ -0.25
GAPVD1-214ENST00000469528 ATP8B3O60423 1300 aa13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 E2F8A0AVK6 867 aa13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 EIF3DO15371 548 aaKnown RBP eCLIP13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 PTPN1P18031 435 aaKnown RBP13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 SYT1P21579 422 aa13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 YWHAQP27348 245 aa13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 ATICP31939 592 aa13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 RDXP35241 583 aaKnown RBP13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 OPRD1P41143 372 aa13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 GRIA2P42262 883 aa13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 DHPSP49366 369 aaPredicted RBP13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 PSMC1P62191 440 aaKnown RBP13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 DHCR24Q15392 516 aa13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 SNRNP35Q16560 246 aaKnown RBP13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 WDR72Q3MJ13 1102 aa13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 ANO7Q6IWH7 933 aa13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 TRMT11Q7Z4G4 463 aaKnown RBP13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 FILIP1Q7Z7B0 1213 aa13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 TTC30AQ86WT1 665 aa13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 NUP93Q8N1F7 819 aa13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 IQUBQ8NA54 791 aa13.5□□□□□ -0.25
GAPVD1-214ENST00000469528 RDH13Q8NBN7 331 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms