RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 ZNF483Q8TF39 744 aaPredicted RBP12.65□□□□□ -0.39
VARS2-205ENST00000469358 PTCD3Q96EY7 689 aaKnown RBP12.65□□□□□ -0.39
VARS2-205ENST00000469358 TRIM55Q9BYV6 548 aa12.65□□□□□ -0.39
VARS2-205ENST00000469358 PPP1R12CQ9BZL4 782 aa12.65□□□□□ -0.39
VARS2-205ENST00000469358 FOXP3Q9BZS1 431 aa12.65□□□□□ -0.39
VARS2-205ENST00000469358 SENP1Q9P0U3 644 aa12.65□□□□□ -0.39
VARS2-205ENST00000469358 DLGAP2Q9P1A6 1054 aa12.65□□□□□ -0.39
VARS2-205ENST00000469358 TBC1D12O60347 775 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 ASS1P00966 412 aaKnown RBP12.64□□□□□ -0.39
VARS2-205ENST00000469358 ATP6V1C1P21283 382 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 KDELR1P24390 212 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 HMGCS2P54868 508 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 CDO1Q16878 200 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 LRRC71Q8N4P6 559 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 SLC25A41Q8N5S1 370 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 PPM1NQ8N819 430 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 TTLL6Q8N841 843 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 KCTD6Q8NC69 237 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 NR2E3Q9Y5X4 410 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 CALB1P05937 261 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 TBXAS1P24557 533 aaPredicted RBP12.64□□□□□ -0.39
VARS2-205ENST00000469358 MCL1Q07820 350 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 XKR3Q5GH77 459 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 TMEM192Q8IY95 271 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.64□□□□□ -0.39
VARS2-205ENST00000469358 ENDOVQ8N8Q3 282 aaKnown RBP12.64□□□□□ -0.39
VARS2-205ENST00000469358 SPATA18Q8TC71 538 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 MCUR1Q96AQ8 359 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 PIWIL1Q96J94 861 aaKnown RBP12.64□□□□□ -0.39
VARS2-205ENST00000469358 ACAP3Q96P50 834 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 DDX50Q9BQ39 737 aaKnown RBP12.64□□□□□ -0.39
VARS2-205ENST00000469358 BTBD10Q9BSF8 475 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 PORCNQ9H237 461 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 SYNCQ9H7C4 482 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 GPATCH2LQ9NWQ4 482 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 CNTN6Q9UQ52 1028 aa12.64□□□□□ -0.39
VARS2-205ENST00000469358 NVLO15381 856 aaKnown RBP12.63□□□□□ -0.39
VARS2-205ENST00000469358 ENO1P06733 434 aaKnown RBP12.63□□□□□ -0.39
VARS2-205ENST00000469358 DLDP09622 509 aaKnown RBP12.63□□□□□ -0.39
VARS2-205ENST00000469358 RASSF2P50749 326 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 THOC5Q13769 683 aaKnown RBP12.63□□□□□ -0.39
VARS2-205ENST00000469358 HSF5Q4G112 596 aaPredicted RBP12.63□□□□□ -0.39
VARS2-205ENST00000469358 ZCCHC23Q6ZST2 131 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 TRIM50Q86XT4 487 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 TREML1Q86YW5 311 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 KBTBD2Q8IY47 623 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 PDIK1LQ8N165 341 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 SCG3Q8WXD2 468 aaKnown RBP12.63□□□□□ -0.39
VARS2-205ENST00000469358 GPRASP2Q96D09 838 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 TWNKQ96RR1 684 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 PPP1R16BQ96T49 567 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 ZNF302Q9NR11 478 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 STYXL1Q9Y6J8 313 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 FCHO1O14526 889 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 ERBB2P04626 1255 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 SUPT20HL2P0C7V6 817 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 CHRM1P11229 460 aaPredicted RBP12.63□□□□□ -0.39
VARS2-205ENST00000469358 PHBP35232 272 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 GHRHRQ02643 423 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 KDSRQ06136 332 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 PIGHQ14442 188 aaPredicted RBP12.63□□□□□ -0.39
VARS2-205ENST00000469358 TMEM132BQ14DG7 1078 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 SUPT20HL1Q3ZLR7 823 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 ARMC2Q8NEN0 867 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 NSUN6Q8TEA1 469 aaKnown RBP12.63□□□□□ -0.39
VARS2-205ENST00000469358 SLC7A3Q8WY07 619 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 LPAR1Q92633 364 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 PEBP4Q96S96 227 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 DHRS4Q9BTZ2 278 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 ADGRA2Q96PE1 1338 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 COL2A1P02458 1487 aaPredicted RBP12.63□□□□□ -0.39
VARS2-205ENST00000469358 H3BRJ5 948 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 ESRRAP11474 423 aaPredicted RBP12.63□□□□□ -0.39
VARS2-205ENST00000469358 MIPP30301 263 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 MXRA7P84157 204 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 CXCL9Q07325 125 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 DPYSL3Q14195 570 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 C15orf59Q2T9L4 293 aaPredicted RBP12.63□□□□□ -0.39
VARS2-205ENST00000469358 WASHC2DQ5SRD0 308 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 NBPF12Q5TAG4 269 aaPredicted RBP12.63□□□□□ -0.39
VARS2-205ENST00000469358 UBR7Q8N806 425 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 UBA3Q8TBC4 463 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 PRPF31Q8WWY3 499 aaKnown RBP12.63□□□□□ -0.39
VARS2-205ENST00000469358 NSL1Q96IY1 281 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 ZNF333Q96JL9 665 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 TEPSINQ96N21 525 aa12.63□□□□□ -0.39
VARS2-205ENST00000469358 TRIM49D1C9J1S8 452 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 TRAFD1O14545 582 aaPredicted RBP12.62□□□□□ -0.39
VARS2-205ENST00000469358 CCDC22O60826 627 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 LGR5O75473 907 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 OATP04181 439 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 ETV4P43268 484 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 SLC18A1P54219 525 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 TRPC3Q13507 836 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 DARS2Q6PI48 645 aaKnown RBP12.62□□□□□ -0.39
VARS2-205ENST00000469358 SAMD7Q7Z3H4 446 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 NETO2Q8NC67 525 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 C20orf27Q9GZN8 174 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 DCLRE1BQ9H816 532 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 ARHGEF4Q9NR80 690 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms