RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 F8VP50 259 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 PITPNM1O00562 1244 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 GABRDO14764 452 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 PRPSAP2O60256 369 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 MGEA5O60502 916 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 HSF2BPO75031 334 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 PDGFRBP09619 1106 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 RARAP10276 462 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 RALAP11233 206 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 CCDC130P13994 396 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 NPR3P17342 541 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 SDC4P31431 198 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 PTPN9P43378 593 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 RPL34P49207 117 aaKnown RBP9.81□□□□□ -0.84
SMC1A-205ENST00000469129 CARSP49589 748 aaKnown RBP9.81□□□□□ -0.84
SMC1A-205ENST00000469129 RGS7P49802 495 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 CLCNKBP51801 687 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 DRG2P55039 364 aaKnown RBP9.81□□□□□ -0.84
SMC1A-205ENST00000469129 SLC25A11Q02978 314 aaKnown RBP9.81□□□□□ -0.84
SMC1A-205ENST00000469129 KLF1Q13351 362 aaPredicted RBP9.81□□□□□ -0.84
SMC1A-205ENST00000469129 PPP1R7Q15435 360 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 SIX1Q15475 284 aaPredicted RBP9.81□□□□□ -0.84
SMC1A-205ENST00000469129 CCNG2Q16589 344 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 UPP1Q16831 310 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 TFDP3Q5H9I0 405 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 EFHC1Q5JVL4 640 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 SPDYCQ5MJ68 293 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 OLFML1Q6UWY5 402 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 SLC24A5Q71RS6 500 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 SLC26A9Q7LBE3 791 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 ZNF598Q86UK7 904 aaKnown RBP9.81□□□□□ -0.84
SMC1A-205ENST00000469129 OSTM1Q86WC4 334 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 TTC13Q8NBP0 860 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 GSTCDQ8NEC7 633 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 FAM71BQ8TC56 605 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 CCHCR1Q8TD31 782 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 SLC2A14Q8TDB8 520 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 SLC35F5Q8WV83 523 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 APBB2Q92870 758 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 ARMC5Q96C12 935 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 TBCBQ99426 244 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 TRIM51Q9BSJ1 452 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 MED10Q9BTT4 135 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 DCLK3Q9C098 648 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 DPEP3Q9H4B8 488 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 DDX43Q9NXZ2 648 aaKnown RBP9.81□□□□□ -0.84
SMC1A-205ENST00000469129 KANSL3Q9P2N6 904 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 TJP2Q9UDY2 1190 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 MTRF1LQ9UGC7 380 aaKnown RBP9.81□□□□□ -0.84
SMC1A-205ENST00000469129 NME7Q9Y5B8 376 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 LTBP2Q14767 1821 aa9.81□□□□□ -0.84
SMC1A-205ENST00000469129 COL4A4P53420 1690 aaPredicted RBP9.8□□□□□ -0.84
SMC1A-205ENST00000469129 VWA8A3KMH1 1905 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 hCG_1818297A0A087WSY0 165 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 GOLGA6BA6NDN3 693 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 ZSCAN5CA6NGD5 496 aaPredicted RBP9.8□□□□□ -0.84
SMC1A-205ENST00000469129 CASTOR2A6NHX0 329 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 SPDYE4A6NLX3 237 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 MEIS3P2A8K0S8 358 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 C9IYK1 514 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 DAB1O75553 588 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 FBXO21O94952 628 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 PARNO95453 639 aaKnown RBP9.8□□□□□ -0.84
SMC1A-205ENST00000469129 CYP11A1P05108 521 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 FAM200BP0CF97 657 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 PDGFRAP16234 1089 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 PTPN1P18031 435 aaKnown RBP9.8□□□□□ -0.84
SMC1A-205ENST00000469129 TYMPP19971 482 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 RDXP35241 583 aaKnown RBP9.8□□□□□ -0.84
SMC1A-205ENST00000469129 HSPA9P38646 679 aaKnown RBP9.8□□□□□ -0.84
SMC1A-205ENST00000469129 PTGIRP43119 386 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 MRPS25P82663 173 aaKnown RBP9.8□□□□□ -0.84
SMC1A-205ENST00000469129 PLCB3Q01970 1234 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 CAV1Q03135 178 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 CALCOCO2Q13137 446 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 PTK6Q13882 451 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 MAPRE1Q15691 268 aaKnown RBP9.8□□□□□ -0.84
SMC1A-205ENST00000469129 ALS2CLQ60I27 953 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 WSCD1Q658N2 575 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 DUPD1Q68J44 220 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 PMF1Q6P1K2 205 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 DRICH1Q6PGQ1 229 aaPredicted RBP9.8□□□□□ -0.84
SMC1A-205ENST00000469129 TRAF7Q6Q0C0 670 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 VSIG1Q86XK7 387 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 SIX6OS1Q8N1H7 587 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 EMC1Q8N766 993 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 BBOF1Q8ND07 529 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 SH3TC2Q8TF17 1288 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 TEKT4Q8WW24 435 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 RXFP2Q8WXD0 754 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 KCTD13Q8WZ19 329 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 RNF25Q96BH1 459 aaPredicted RBP9.8□□□□□ -0.84
SMC1A-205ENST00000469129 CCDC114Q96M63 670 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 FMO2Q99518 471 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 DUSP16Q9BY84 665 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 TRPV6Q9H1D0 765 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 DPH5Q9H2P9 285 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 ELAC1Q9H777 363 aaKnown RBP9.8□□□□□ -0.84
SMC1A-205ENST00000469129 ZWILCHQ9H900 591 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 PAK6Q9NQU5 681 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms