RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 AXIN1O15169 862 aa22.49■■□□□ 1.19
COL9A3-207ENST00000467819 POLR2DO15514 142 aaKnown RBP22.49■■□□□ 1.19
COL9A3-207ENST00000467819 GDF9O60383 454 aa22.49■■□□□ 1.19
COL9A3-207ENST00000467819 RPP40O75818 363 aaKnown RBP22.49■■□□□ 1.19
COL9A3-207ENST00000467819 CYP24A1Q07973 514 aa22.49■■□□□ 1.19
COL9A3-207ENST00000467819 DENND5BQ6ZUT9 1274 aa22.49■■□□□ 1.19
COL9A3-207ENST00000467819 UNC13DQ70J99 1090 aa22.49■■□□□ 1.19
COL9A3-207ENST00000467819 HS2ST1Q7LGA3 356 aa22.49■■□□□ 1.19
COL9A3-207ENST00000467819 XXYLT1Q8NBI6 393 aa22.49■■□□□ 1.19
COL9A3-207ENST00000467819 OR6B3Q8NGW1 331 aa22.49■■□□□ 1.19
COL9A3-207ENST00000467819 RPLP0P6Q8NHW5 317 aa22.49■■□□□ 1.19
COL9A3-207ENST00000467819 MYCBPAPQ8TBZ2 947 aa22.49■■□□□ 1.19
COL9A3-207ENST00000467819 SCFD1Q8WVM8 642 aa22.49■■□□□ 1.19
COL9A3-207ENST00000467819 CD101Q93033 1021 aa22.49■■□□□ 1.19
COL9A3-207ENST00000467819 TRPM5Q9NZQ8 1165 aa22.49■■□□□ 1.19
COL9A3-207ENST00000467819 NME7Q9Y5B8 376 aa22.49■■□□□ 1.19
COL9A3-207ENST00000467819 GNL1P36915 607 aaPredicted RBP22.48■■□□□ 1.19
COL9A3-207ENST00000467819 TNNC1P63316 161 aa22.48■■□□□ 1.19
COL9A3-207ENST00000467819 PSMD2Q13200 908 aa22.48■■□□□ 1.19
COL9A3-207ENST00000467819 CACNA2D4Q7Z3S7 1137 aa22.48■■□□□ 1.19
COL9A3-207ENST00000467819 KBTBD6Q86V97 674 aa22.48■■□□□ 1.19
COL9A3-207ENST00000467819 EZH1Q92800 747 aaPredicted RBP22.48■■□□□ 1.19
COL9A3-207ENST00000467819 ARRDC1-AS1Q9H2J1 176 aa22.48■■□□□ 1.19
COL9A3-207ENST00000467819 LINC00597Q9H2U6 94 aa22.48■■□□□ 1.19
COL9A3-207ENST00000467819 MAGEF1Q9HAY2 307 aa22.48■■□□□ 1.19
COL9A3-207ENST00000467819 ARHGAP26Q9UNA1 814 aa22.48■■□□□ 1.19
COL9A3-207ENST00000467819 CNOT1A5YKK6 2376 aaKnown RBP22.48■■□□□ 1.19
COL9A3-207ENST00000467819 CCDC163A0A0D9SF12 145 aa22.47■■□□□ 1.19
COL9A3-207ENST00000467819 F8VP50 259 aa22.47■■□□□ 1.19
COL9A3-207ENST00000467819 SLC30A4O14863 429 aa22.47■■□□□ 1.19
COL9A3-207ENST00000467819 TRIM66O15016 1216 aa22.47■■□□□ 1.19
COL9A3-207ENST00000467819 EHHADHQ08426 723 aa22.47■■□□□ 1.19
COL9A3-207ENST00000467819 NR1H3Q13133 447 aa22.47■■□□□ 1.19
COL9A3-207ENST00000467819 CCDC6Q16204 474 aa22.47■■□□□ 1.19
COL9A3-207ENST00000467819 WDR72Q3MJ13 1102 aa22.47■■□□□ 1.19
COL9A3-207ENST00000467819 FBXO43Q4G163 708 aa22.47■■□□□ 1.19
COL9A3-207ENST00000467819 DPEP3Q9H4B8 488 aa22.47■■□□□ 1.19
COL9A3-207ENST00000467819 SLC39A2Q9NP94 309 aa22.47■■□□□ 1.19
COL9A3-207ENST00000467819 TACC1O75410 805 aa22.46■■□□□ 1.19
COL9A3-207ENST00000467819 ABL1P00519 1130 aa22.46■■□□□ 1.19
COL9A3-207ENST00000467819 TCF3P15923 654 aa22.46■■□□□ 1.19
COL9A3-207ENST00000467819 AFMP43652 599 aa22.46■■□□□ 1.19
COL9A3-207ENST00000467819 PDE6CP51160 858 aa22.46■■□□□ 1.19
COL9A3-207ENST00000467819 ZXDBP98169 803 aa22.46■■□□□ 1.19
COL9A3-207ENST00000467819 IFRD2Q12894 506 aaPredicted RBP22.46■■□□□ 1.19
COL9A3-207ENST00000467819 TRPC3Q13507 836 aa22.46■■□□□ 1.19
COL9A3-207ENST00000467819 CAMKK1Q8N5S9 505 aa22.46■■□□□ 1.19
COL9A3-207ENST00000467819 ZNF516Q92618 1163 aa22.46■■□□□ 1.19
COL9A3-207ENST00000467819 CEP295NLQ96MC4 621 aa22.46■■□□□ 1.19
COL9A3-207ENST00000467819 TTLL2Q9BWV7 592 aa22.46■■□□□ 1.19
COL9A3-207ENST00000467819 NXF1Q9UBU9 619 aaKnown RBP22.46■■□□□ 1.19
COL9A3-207ENST00000467819 ACACBO00763 2458 aa22.46■■□□□ 1.19
COL9A3-207ENST00000467819 LEFTY2O00292 366 aa22.45■■□□□ 1.18
COL9A3-207ENST00000467819 CLSTN1O94985 981 aa22.45■■□□□ 1.18
COL9A3-207ENST00000467819 NFATC1O95644 943 aa22.45■■□□□ 1.18
COL9A3-207ENST00000467819 PTPN1P18031 435 aaKnown RBP22.45■■□□□ 1.18
COL9A3-207ENST00000467819 ME1P48163 572 aa22.45■■□□□ 1.18
COL9A3-207ENST00000467819 CACNA2D1P54289 1103 aa22.45■■□□□ 1.18
COL9A3-207ENST00000467819 MYL6P60660 151 aa22.45■■□□□ 1.18
COL9A3-207ENST00000467819 SNRPFP62306 86 aaKnown RBP22.45■■□□□ 1.18
COL9A3-207ENST00000467819 CUL4BQ13620 913 aa22.45■■□□□ 1.18
COL9A3-207ENST00000467819 SF3A2Q15428 464 aaKnown RBP22.45■■□□□ 1.18
COL9A3-207ENST00000467819 AASDHQ4L235 1098 aaPredicted RBP22.45■■□□□ 1.18
COL9A3-207ENST00000467819 C8orf48Q96LL4 319 aa22.45■■□□□ 1.18
COL9A3-207ENST00000467819 GZF1Q9H116 711 aaPredicted RBP22.45■■□□□ 1.18
COL9A3-207ENST00000467819 FAM13BQ9NYF5 915 aa22.45■■□□□ 1.18
COL9A3-207ENST00000467819 EHD2Q9NZN4 543 aa22.45■■□□□ 1.18
COL9A3-207ENST00000467819 ZNF840PA6NDX5 716 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 A8MXQ7 604 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 CLDN5O00501 218 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 FOXD2O60548 495 aaPredicted RBP22.44■■□□□ 1.18
COL9A3-207ENST00000467819 PHACTR2O75167 634 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 EPN2O95208 641 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 ZSCAN22P10073 491 aaPredicted RBP22.44■■□□□ 1.18
COL9A3-207ENST00000467819 CASP4P49662 377 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 NOP14P78316 857 aaKnown RBP22.44■■□□□ 1.18
COL9A3-207ENST00000467819 DMC1Q14565 340 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 BMT2Q1RMZ1 405 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 PPM1JQ5JR12 505 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 SYT13Q7L8C5 426 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 GRAMD1CQ8IYS0 662 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 NUP205Q92621 2012 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 ACDQ96AP0 544 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 LOXL4Q96JB6 756 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 ZNF518BQ9C0D4 1074 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 ELOVL4Q9GZR5 314 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 TMEM30AQ9NV96 361 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 SMPD4Q9NXE4 827 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 PCDHA7Q9UN72 937 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 CPQQ9Y646 472 aa22.44■■□□□ 1.18
COL9A3-207ENST00000467819 THADAQ6YHU6 1953 aa22.43■■□□□ 1.18
COL9A3-207ENST00000467819 EPG5Q9HCE0 2579 aa22.43■■□□□ 1.18
COL9A3-207ENST00000467819 SCAMP3O14828 347 aaKnown RBP22.43■■□□□ 1.18
COL9A3-207ENST00000467819 EXOC3O60645 756 aa22.43■■□□□ 1.18
COL9A3-207ENST00000467819 F13A1P00488 732 aa22.43■■□□□ 1.18
COL9A3-207ENST00000467819 HSP90AA1P07900 732 aaKnown RBP22.43■■□□□ 1.18
COL9A3-207ENST00000467819 PFKLP17858 780 aa22.43■■□□□ 1.18
COL9A3-207ENST00000467819 KCNA4P22459 653 aa22.43■■□□□ 1.18
COL9A3-207ENST00000467819 RAP1GAPP47736 663 aa22.43■■□□□ 1.18
COL9A3-207ENST00000467819 SEC13P55735 322 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms