RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ARL4CP56559 192 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 GPS1Q13098 491 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 G3BP1Q13283 466 aaKnown RBP eCLIP4.78□□□□□ -1.64
VPS13A-209ENST00000467124 GEN1Q17RS7 908 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 DEPDC1Q5TB30 811 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 ANKRD45Q5TZF3 282 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 ERICH6BQ5W0A0 696 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 FOXR2Q6PJQ5 311 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 SPOCD1Q6ZMY3 1216 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 LCNL1Q6ZST4 164 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 HEATR4Q86WZ0 1026 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 RHOT2Q8IXI1 618 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 FTSJ3Q8IY81 847 aaKnown RBP4.78□□□□□ -1.64
VPS13A-209ENST00000467124 SPARTQ8N0X7 666 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 TTC9BQ8N6N2 239 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 C11orf44Q8N8P7 122 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 POC1BQ8TC44 478 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 EDAQ92838 391 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 GRAMD1AQ96CP6 724 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 MPP4Q96JB8 637 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 SSBP3Q9BWW4 388 aaPredicted RBP4.78□□□□□ -1.64
VPS13A-209ENST00000467124 TMX4Q9H1E5 349 aaPredicted RBP4.78□□□□□ -1.64
VPS13A-209ENST00000467124 ZNF768Q9H5H4 540 aaKnown RBP4.78□□□□□ -1.64
VPS13A-209ENST00000467124 TAF1DQ9H5J8 278 aaPredicted RBP4.78□□□□□ -1.64
VPS13A-209ENST00000467124 SEPSECSQ9HD40 501 aaKnown RBP4.78□□□□□ -1.64
VPS13A-209ENST00000467124 RAPGEFL1Q9UHV5 662 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 NDRG4Q9ULP0 352 aaKnown RBP4.78□□□□□ -1.64
VPS13A-209ENST00000467124 SORCS3Q9UPU3 1222 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 OTOL1A6NHN0 477 aaPredicted RBP4.77□□□□□ -1.65
VPS13A-209ENST00000467124 TRIM24O15164 1050 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 CCP110O43303 1012 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 KCNQ3O43525 872 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 PPP6R2O75170 966 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 SOAT2O75908 522 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 INMTO95050 263 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 SCAF4O95104 1147 aaKnown RBP4.77□□□□□ -1.65
VPS13A-209ENST00000467124 ITGB3P05106 788 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 ITGA2BP08514 1039 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 KCNA2P16389 499 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 MAN2A2P49641 1150 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 NDUFV1P49821 464 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 BCAT1P54687 386 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 LOXL3P58215 753 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 FAM189BP81408 668 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 FPGSQ05932 587 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 CRHR2Q13324 411 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 CNGB1Q14028 1251 aaPredicted RBP4.77□□□□□ -1.65
VPS13A-209ENST00000467124 GRM4Q14833 912 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 LY6KQ17RY6 165 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 SLC5A9Q2M3M2 681 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 RBM20Q5T481 1227 aaKnown RBP4.77□□□□□ -1.65
VPS13A-209ENST00000467124 MAMDC4Q6UXC1 1216 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 RFX8Q6ZV50 586 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 MAATS1Q7Z4T9 603 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 C2CD5Q86YS7 1000 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 RASGRP3Q8IV61 690 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 MAPKAPK5Q8IW41 473 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 ASB12Q8WXK4 309 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 MED15Q96RN5 788 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 DCLRE1CQ96SD1 692 aaKnown RBP4.77□□□□□ -1.65
VPS13A-209ENST00000467124 RNPEPQ9H4A4 650 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 XPNPEP3Q9NQH7 507 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 FEM1BQ9UK73 627 aa4.77□□□□□ -1.65
VPS13A-209ENST00000467124 AQP7P3A6NL99 342 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 ZSCAN9O15535 394 aaPredicted RBP4.76□□□□□ -1.65
VPS13A-209ENST00000467124 PRICKLE3O43900 615 aaPredicted RBP4.76□□□□□ -1.65
VPS13A-209ENST00000467124 FAM20BO75063 409 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 RHOBTB3O94955 611 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 CSF1RP07333 972 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 PEPDP12955 493 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 ACO1P21399 889 aaKnown RBP4.76□□□□□ -1.65
VPS13A-209ENST00000467124 CD6P30203 668 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 LRPAP1P30533 357 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 NPTX2P47972 431 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 SELENOPP49908 381 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 ALDH18A1P54886 795 aaKnown RBP4.76□□□□□ -1.65
VPS13A-209ENST00000467124 SATB1Q01826 763 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 NSUN2Q08J23 767 aaKnown RBP eCLIP4.76□□□□□ -1.65
VPS13A-209ENST00000467124 FOXO1Q12778 655 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 EIF2B5Q13144 721 aaKnown RBP4.76□□□□□ -1.65
VPS13A-209ENST00000467124 SIM2Q14190 667 aaPredicted RBP4.76□□□□□ -1.65
VPS13A-209ENST00000467124 P3H1Q32P28 736 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 ARL6IP4Q66PJ3 421 aaKnown RBP4.76□□□□□ -1.65
VPS13A-209ENST00000467124 ABLIM2Q6H8Q1 611 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 MRNIPQ6NTE8 343 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 RINT1Q6NUQ1 792 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 ARMC6Q6NXE6 501 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 CLEC9AQ6UXN8 241 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 SLC15A3Q8IY34 581 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 ADGRG5Q8IZF4 528 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 OTUD7AQ8TE49 926 aaPredicted RBP4.76□□□□□ -1.65
VPS13A-209ENST00000467124 MCRS1Q96EZ8 462 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 COG8Q96MW5 612 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 TRAPPC9Q96Q05 1148 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 PTDSS2Q9BVG9 487 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 BRD8Q9H0E9 1235 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 DHX36Q9H2U1 1008 aaKnown RBP4.76□□□□□ -1.65
VPS13A-209ENST00000467124 PABPC3Q9H361 631 aaKnown RBP4.76□□□□□ -1.65
VPS13A-209ENST00000467124 ZBTB26Q9HCK0 441 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms