RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SOX5P35711 763 aa4.88□□□□□ -1.63
XRN1-206ENST00000467077 RPS13P62277 151 aaKnown RBP4.88□□□□□ -1.63
XRN1-206ENST00000467077 STAT4Q14765 748 aa4.88□□□□□ -1.63
XRN1-206ENST00000467077 KIF22Q14807 665 aa4.88□□□□□ -1.63
XRN1-206ENST00000467077 FAM160B1Q5W0V3 765 aa4.88□□□□□ -1.63
XRN1-206ENST00000467077 RGS7BPQ6MZT1 257 aaPredicted RBP4.88□□□□□ -1.63
XRN1-206ENST00000467077 USP37Q86T82 979 aa4.88□□□□□ -1.63
XRN1-206ENST00000467077 UBR7Q8N806 425 aa4.88□□□□□ -1.63
XRN1-206ENST00000467077 FAM46DQ8NEK8 389 aa4.88□□□□□ -1.63
XRN1-206ENST00000467077 KAT5Q92993 513 aa4.88□□□□□ -1.63
XRN1-206ENST00000467077 SLC46A1Q96NT5 459 aa4.88□□□□□ -1.63
XRN1-206ENST00000467077 CNOT3O75175 753 aaKnown RBP4.87□□□□□ -1.63
XRN1-206ENST00000467077 PRKD3O94806 890 aa4.87□□□□□ -1.63
XRN1-206ENST00000467077 KHDC1Q4VXA5 237 aaKnown RBP4.87□□□□□ -1.63
XRN1-206ENST00000467077 C4orf46Q504U0 113 aa4.87□□□□□ -1.63
XRN1-206ENST00000467077 ZNF398Q8TD17 642 aa4.87□□□□□ -1.63
XRN1-206ENST00000467077 MEIS3Q99687 375 aa4.87□□□□□ -1.63
XRN1-206ENST00000467077 PTDSS2Q9BVG9 487 aa4.87□□□□□ -1.63
XRN1-206ENST00000467077 SLKQ9H2G2 1235 aaPredicted RBP4.87□□□□□ -1.63
XRN1-206ENST00000467077 GABRQQ9UN88 632 aa4.87□□□□□ -1.63
XRN1-206ENST00000467077 SSX2IPQ9Y2D8 614 aa4.87□□□□□ -1.63
XRN1-206ENST00000467077 IFITM10A6NMD0 228 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 NT5C1B-RDH14C9J2C7 533 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 HTRA2O43464 458 aaPredicted RBP4.86□□□□□ -1.63
XRN1-206ENST00000467077 CPEP16870 476 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 SNAPC2Q13487 334 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 BOP1Q14137 746 aaKnown RBP4.86□□□□□ -1.63
XRN1-206ENST00000467077 E2F2Q14209 437 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 C3orf36Q3SXR2 165 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 CAPRIN2Q6IMN6 1127 aaKnown RBP4.86□□□□□ -1.63
XRN1-206ENST00000467077 TTC7BQ86TV6 843 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 NR2C2APQ86WQ0 139 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 SOCS4Q8WXH5 440 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 DNASE2BQ8WZ79 361 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 ZNF479Q96JC4 524 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 FAM84BQ96KN1 310 aaPredicted RBP4.86□□□□□ -1.63
XRN1-206ENST00000467077 LMLNQ96KR4 655 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 NLRP4Q96MN2 994 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 CAMK1GQ96NX5 476 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 HESX1Q9UBX0 185 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 ERRFI1Q9UJM3 462 aaPredicted RBP4.86□□□□□ -1.63
XRN1-206ENST00000467077 IPPQ9Y573 584 aa4.86□□□□□ -1.63
XRN1-206ENST00000467077 NGFRP08138 427 aa4.85□□□□□ -1.63
XRN1-206ENST00000467077 FTH1P19P0C7X4 201 aa4.85□□□□□ -1.63
XRN1-206ENST00000467077 MYCLP12524 364 aaPredicted RBP4.85□□□□□ -1.63
XRN1-206ENST00000467077 SATB1Q01826 763 aa4.85□□□□□ -1.63
XRN1-206ENST00000467077 LONRF3Q496Y0 759 aa4.85□□□□□ -1.63
XRN1-206ENST00000467077 RNASE12Q5GAN4 147 aaKnown RBP4.85□□□□□ -1.63
XRN1-206ENST00000467077 CT47A1Q5JQC4 288 aaPredicted RBP4.85□□□□□ -1.63
XRN1-206ENST00000467077 BCDIN3DQ7Z5W3 292 aaKnown RBP4.85□□□□□ -1.63
XRN1-206ENST00000467077 MMP21Q8N119 569 aa4.85□□□□□ -1.63
XRN1-206ENST00000467077 TNPO1Q92973 898 aaKnown RBP4.85□□□□□ -1.63
XRN1-206ENST00000467077 DMRTA2Q96SC8 542 aa4.85□□□□□ -1.63
XRN1-206ENST00000467077 TUBD1Q9UJT1 453 aa4.85□□□□□ -1.63
XRN1-206ENST00000467077 ZDHHC8Q9ULC8 765 aa4.85□□□□□ -1.63
XRN1-206ENST00000467077 CFAP20Q9Y6A4 193 aaKnown RBP4.85□□□□□ -1.63
XRN1-206ENST00000467077 CCDC154A6NI56 674 aa4.84□□□□□ -1.63
XRN1-206ENST00000467077 PHKG2P15735 406 aa4.84□□□□□ -1.63
XRN1-206ENST00000467077 THBS4P35443 961 aa4.84□□□□□ -1.63
XRN1-206ENST00000467077 LILRA4P59901 499 aa4.84□□□□□ -1.63
XRN1-206ENST00000467077 E2F1Q01094 437 aa4.84□□□□□ -1.63
XRN1-206ENST00000467077 CPA6Q8N4T0 437 aa4.84□□□□□ -1.63
XRN1-206ENST00000467077 B4GALNT2Q8NHY0 566 aa4.84□□□□□ -1.63
XRN1-206ENST00000467077 NSUN6Q8TEA1 469 aaKnown RBP4.84□□□□□ -1.63
XRN1-206ENST00000467077 PNISRQ8TF01 805 aaKnown RBP4.84□□□□□ -1.63
XRN1-206ENST00000467077 C1orf43Q9BWL3 253 aa4.84□□□□□ -1.63
XRN1-206ENST00000467077 CAAP1Q9H8G2 361 aa4.84□□□□□ -1.63
XRN1-206ENST00000467077 ZBTB40Q9NUA8 1239 aa4.84□□□□□ -1.63
XRN1-206ENST00000467077 LIMCH1Q9UPQ0 1083 aa4.84□□□□□ -1.63
XRN1-206ENST00000467077 IGLV5-39A0A0G2JS06 123 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 PRSS29PA6NIE9 313 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 SYF2O95926 243 aaKnown RBP4.83□□□□□ -1.64
XRN1-206ENST00000467077 CTSAP10619 480 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 PIM1P11309 404 aaPredicted RBP4.83□□□□□ -1.64
XRN1-206ENST00000467077 TNFRSF1BP20333 461 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 MASP1P48740 699 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 PDE6CP51160 858 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 ERVK-21P61565 698 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 KLF1Q13351 362 aaPredicted RBP4.83□□□□□ -1.64
XRN1-206ENST00000467077 IQCB1Q15051 598 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 ACAP2Q15057 778 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 DEPDC1Q5TB30 811 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 TMPRSS12Q86WS5 348 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 SPATS2Q86XZ4 545 aaKnown RBP4.83□□□□□ -1.64
XRN1-206ENST00000467077 CHAC2Q8WUX2 184 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 GJB4Q9NTQ9 266 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 ASIC5Q9NY37 505 aa4.83□□□□□ -1.64
XRN1-206ENST00000467077 TRIM75PA6NK02 468 aa4.82□□□□□ -1.64
XRN1-206ENST00000467077 AP4M1O00189 453 aa4.82□□□□□ -1.64
XRN1-206ENST00000467077 ERC2O15083 957 aa4.82□□□□□ -1.64
XRN1-206ENST00000467077 CLSTN1O94985 981 aa4.82□□□□□ -1.64
XRN1-206ENST00000467077 PRDX5P30044 214 aa4.82□□□□□ -1.64
XRN1-206ENST00000467077 CFHR1Q03591 330 aa4.82□□□□□ -1.64
XRN1-206ENST00000467077 SLC9C1Q4G0N8 1177 aa4.82□□□□□ -1.64
XRN1-206ENST00000467077 TMTC4Q5T4D3 741 aa4.82□□□□□ -1.64
XRN1-206ENST00000467077 ZNF324BQ6AW86 544 aaPredicted RBP4.82□□□□□ -1.64
XRN1-206ENST00000467077 TMEM65Q6PI78 240 aa4.82□□□□□ -1.64
XRN1-206ENST00000467077 SFTPA1Q8IWL2 248 aa4.82□□□□□ -1.64
XRN1-206ENST00000467077 SIRT6Q8N6T7 355 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms