RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 CLEC16AQ2KHT3 1053 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 BRDTQ58F21 947 aaPredicted RBP18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 PRUNE1Q86TP1 453 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 SATL1Q86VE3 508 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 SAMD3Q8N6K7 520 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 TMC2Q8TDI7 906 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 AAASQ9NRG9 546 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 TPD52L2O43399 206 aaKnown RBP18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 GAS8O95995 478 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 HLA-DRAP01903 254 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 SLC18A1P54219 525 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 MED21Q13503 144 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 EMC2Q15006 297 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 C6orf163Q5TEZ5 329 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 SPOCK2Q92563 424 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 SIKE1Q9BRV8 207 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 R3HDMLQ9H3Y0 253 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 APOBEC3GQ9HC16 384 aaKnown RBP18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 CYLDQ9NQC7 956 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 C1orf112Q9NSG2 853 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 ARHGAP28Q9P2N2 729 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 FBXO40Q9UH90 709 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 PMM2O15305 246 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 SNRPFP62306 86 aaKnown RBP18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 CDC16Q13042 620 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 CYP1B1Q16678 543 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 TMEM270Q6UE05 265 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 TRPM4Q8TD43 1214 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 DNAJC1Q96KC8 554 aaKnown RBP18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 C11orf70Q9BRQ4 267 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 ARL8BQ9NVJ2 186 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 USTQ9Y2C2 406 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 PSME4Q14997 1843 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 TNS1Q9HBL0 1735 aaKnown RBP18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 UNGP13051 313 aaPredicted RBP18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 ITIH2P19823 946 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 PIK3CAP42336 1068 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 STAT4Q14765 748 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 MCOLN2Q8IZK6 566 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 OR5B17Q8NGF7 314 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 PSPC1Q8WXF1 523 aaKnown RBP18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 KLHL11Q9NVR0 708 aa18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 AGO2Q9UKV8 859 aaKnown RBP18.87■□□□□ 0.61
SNAPC3-205ENST00000467062 MYPNQ86TC9 1320 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 FER1L6Q2WGJ9 1857 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 CFAP69A5D8W1 941 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 PRPF4O43172 522 aaKnown RBP eCLIP18.86■□□□□ 0.613e-6■□□□□ 10.6
SNAPC3-205ENST00000467062 VNN1O95497 513 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 VARSP26640 1264 aaKnown RBP18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 SERPINB8P50452 374 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 RAP1GDS1P52306 607 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 SGO2Q562F6 1265 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 MCPH1Q8NEM0 835 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 DENND1AQ8TEH3 1009 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 VTI1AQ96AJ9 217 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 TEX13BQ9BXU2 312 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 VPS33BQ9H267 617 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 R3HDM2Q9Y2K5 976 aaKnown RBP18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 MTA2O94776 668 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 CDK4P11802 303 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 GLRA2P23416 452 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 PGM1P36871 562 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 CETN2P41208 172 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 GRIA2P42262 883 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 ASPHQ12797 758 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 ZNF394Q53GI3 561 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 HSP90AA5PQ58FG0 334 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 CCDC62Q6P9F0 684 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 TSHZ1Q6ZSZ6 1077 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 OTOAQ7RTW8 1153 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 ALDH16A1Q8IZ83 802 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 DOCK5Q9H7D0 1870 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 ACAD9Q9H845 621 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 ZDHHC7Q9NXF8 308 aa18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 SMG5Q9UPR3 1016 aaKnown RBP18.86■□□□□ 0.61
SNAPC3-205ENST00000467062 K7ERI5 159 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 STRNO43815 780 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 ALOX15P16050 662 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 GALK1P51570 392 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 TCEAL1Q15170 157 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 SH3D19Q5HYK7 790 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 WDR44Q5JSH3 913 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 AGAP3Q96P47 875 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 SENP7Q9BQF6 1050 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 EBF3Q9H4W6 596 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 NPHS2Q9NP85 383 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 TAS2R1Q9NYW7 299 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 UVRAGQ9P2Y5 699 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 SPDYE16A6NNV3 312 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 SPATA31C2B4DYI2 1134 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 EXTL3O43909 919 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 C4BPAP04003 597 aaKnown RBP18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 ESRRAP11474 423 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 ATP13A4Q4VNC1 1196 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 CATSPERGQ6ZRH7 1159 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 RINLQ6ZS11 566 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 ANKS1BQ7Z6G8 1248 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 ZBTB33Q86T24 672 aa18.85■□□□□ 0.61
SNAPC3-205ENST00000467062 ZNF302Q9NR11 478 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms