RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 PHACTR2O75167 634 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 AKAP3O75969 853 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 DDHD2O94830 711 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 CTSAP10619 480 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 TYMPP19971 482 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 GBP2P32456 591 aaPredicted RBP7.42□□□□□ -1.22
CLDN4-204ENST00000466411 CTHP32929 405 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 AARSP49588 968 aaKnown RBP eCLIP7.42□□□□□ -1.22
CLDN4-204ENST00000466411 MXI1P50539 228 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 NOVA1P51513 510 aaKnown RBP7.42□□□□□ -1.22
CLDN4-204ENST00000466411 CLCN4P51793 760 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 CLCNKBP51801 687 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 YWHAEP62258 255 aaKnown RBP7.42□□□□□ -1.22
CLDN4-204ENST00000466411 TYRO3Q06418 890 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 BIRC3Q13489 604 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 SGSM1Q2NKQ1 1148 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 GLRA4Q5JXX5 417 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 C9orf57Q5W0N0 161 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 ANKRD40Q6AI12 368 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 ZNF280DQ6N043 979 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 FUT10Q6P4F1 479 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 TMEM173Q86WV6 379 aaPredicted RBP7.42□□□□□ -1.22
CLDN4-204ENST00000466411 ZNF280BQ86YH2 543 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 FMNL3Q8IVF7 1028 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 VPS52Q8N1B4 723 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 TOP6BLQ8N6T0 577 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 ENOX1Q8TC92 643 aaKnown RBP7.42□□□□□ -1.22
CLDN4-204ENST00000466411 HDAC7Q8WUI4 952 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 FGF14Q92915 247 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 GLMNQ92990 594 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 SUSD3Q96L08 255 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 TTPALQ9BTX7 342 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 SLC6A16Q9GZN6 736 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 PDE11AQ9HCR9 933 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 EVA1BQ9NVM1 165 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 GDAP2Q9NXN4 497 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 FNIP2Q9P278 1114 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 DNAJB4Q9UDY4 337 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 PRG3Q9Y2Y8 225 aaPredicted RBP7.42□□□□□ -1.22
CLDN4-204ENST00000466411 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.42□□□□□ -1.22
CLDN4-204ENST00000466411 RAI2Q9Y5P3 530 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 TSC2P49815 1807 aa7.42□□□□□ -1.22
CLDN4-204ENST00000466411 PLXNB3Q9ULL4 1909 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 GTPBP10A4D1E9 387 aaKnown RBP7.41□□□□□ -1.22
CLDN4-204ENST00000466411 GOLGA8IPA6NC78 632 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 OR6C75A6NL08 312 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 GOLGA8JA6NMD2 632 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 KPNA7A9QM74 516 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 PIRO00625 290 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 S1PR4O95977 384 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 ITGB3P05106 788 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 CYP11A1P05108 521 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 TPM3P06753 285 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 NFICP08651 508 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 KRT19P08727 400 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 BMP6P22004 513 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 TBXAS1P24557 533 aaPredicted RBP7.41□□□□□ -1.22
CLDN4-204ENST00000466411 PCSK1P29120 753 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 PIK3CAP42336 1068 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 LHX1P48742 406 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 LILRA4P59901 499 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 TNNC1P63316 161 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 MYL7Q01449 175 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 DSG1Q02413 1049 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 YWHAHQ04917 246 aaPredicted RBP7.41□□□□□ -1.22
CLDN4-204ENST00000466411 KCNH2Q12809 1159 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 NCOA4Q13772 614 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 NFKBIBQ15653 356 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 MAPRE1Q15691 268 aaKnown RBP7.41□□□□□ -1.22
CLDN4-204ENST00000466411 DPCR1Q3MIW9 517 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 ZACNQ401N2 412 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 SEZ6Q53EL9 994 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 WDR44Q5JSH3 913 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 TCERG1LQ5VWI1 586 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 TPGS2Q68CL5 300 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 PARM1Q6UWI2 310 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 CYP26C1Q6V0L0 522 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 DSTYKQ6XUX3 929 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 ENOSF1Q7L5Y1 443 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 TRAPPC11Q7Z392 1133 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 RNF168Q8IYW5 571 aaPredicted RBP7.41□□□□□ -1.22
CLDN4-204ENST00000466411 THEM5Q8N1Q8 247 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 FBXL13Q8NEE6 735 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 C2orf15Q8WU43 125 aaKnown RBP7.41□□□□□ -1.22
CLDN4-204ENST00000466411 ERCC4Q92889 916 aaPredicted RBP7.41□□□□□ -1.22
CLDN4-204ENST00000466411 JAKMIP2Q96AA8 810 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 CCDC127Q96BQ5 260 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 ZNF707Q96C28 371 aaPredicted RBP7.41□□□□□ -1.22
CLDN4-204ENST00000466411 ZMAT2Q96NC0 199 aaKnown RBP7.41□□□□□ -1.22
CLDN4-204ENST00000466411 NELL2Q99435 816 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 VN1R3Q9BXE9 311 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 SRRTQ9BXP5 876 aaKnown RBP7.41□□□□□ -1.22
CLDN4-204ENST00000466411 MTMR12Q9C0I1 747 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 CHRDQ9H2X0 955 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 CHST7Q9NS84 486 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 TMEM63CQ9P1W3 806 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 HSFX1Q9UBD0 423 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 TUBGCP4Q9UGJ1 667 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 FKBPLQ9UIM3 349 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 KLK13Q9UKR3 277 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms