RNA–Protein interactions for RNA: ENST00000466407.1

ATP2B4-206, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 3

Gene ATP2B4, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-206ENST00000466407 PLEKP08567 350 aaPredicted RBP7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 HNRNPA1P09651 372 aaKnown RBP eCLIP7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 LINC00271P0C7V0 271 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 CSH1P0DML2 217 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 CSH2P0DML3 217 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 PRLRP16471 622 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 SYN1P17600 705 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 ELF1P32519 619 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 RAP1GAPP47736 663 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 KPNA1P52294 538 aaPredicted RBP7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 GALCP54803 685 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 ETF1P62495 437 aaKnown RBP7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 APBA1Q02410 837 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 VEPH1Q14D04 833 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 PTPN14Q15678 1187 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 LRIT3Q3SXY7 679 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 PABPC1LQ4VXU2 614 aaKnown RBP7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 ZNF394Q53GI3 561 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 MDH1BQ5I0G3 518 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 LRRC38Q5VT99 294 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 NAA35Q5VZE5 725 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 PM20D1Q6GTS8 502 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 DNAJC24Q6P3W2 148 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 KLHDC10Q6PID8 442 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 CLEC20AQ6ZU45 233 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 POLNQ7Z5Q5 900 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 OSTM1Q86WC4 334 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 TCEAL8Q8IYN2 117 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 VPS52Q8N1B4 723 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 SIX6OS1Q8N1H7 587 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 OLIG1Q8TAK6 271 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 SLC2A14Q8TDB8 520 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 SLC20A1Q8WUM9 679 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 TFAP2BQ92481 460 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 MYLPFQ96A32 169 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 ZNF653Q96CK0 615 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 MCRS1Q96EZ8 462 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 TWNKQ96RR1 684 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 TBCBQ99426 244 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 RTP3Q9BQQ7 232 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 MED10Q9BTT4 135 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 TTLL2Q9BWV7 592 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 IRX2Q9BZI1 471 aaPredicted RBP7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 CXCL16Q9H2A7 254 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 RETREG1Q9H6L5 497 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 CRTAC1Q9NQ79 661 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 KRT82Q9NSB4 513 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 CLIC5Q9NZA1 410 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 IL37Q9NZH6 218 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 CXXC1Q9P0U4 656 aaPredicted RBP7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 CNOT8Q9UFF9 292 aaKnown RBP7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 IP6K2Q9UHH9 426 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 STAP1Q9ULZ2 295 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 USP3Q9Y6I4 520 aa7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 NUP210Q8TEM1 1887 aaPredicted RBP7.12□□□□□ -1.27
ATP2B4-206ENST00000466407 DOCK4Q8N1I0 1966 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 CCDC66A2RUB6 948 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 MTMR11A4FU01 709 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 ZNF487B1APH4 448 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 DPYSL4O14531 572 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 FSCN2O14926 492 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 ZNF263O14978 683 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 PSTPIP1O43586 416 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 B4GALT3O60512 393 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 ITGB1P05556 798 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 PDGFRBP09619 1106 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 TCP1P17987 556 aaKnown RBP7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 LMO2P25791 158 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 DDX6P26196 483 aaKnown RBP eCLIP7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 HTR7P34969 479 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 PCK1P35558 622 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 CETN2P41208 172 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 PTPN9P43378 593 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 EPHB4P54760 987 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 SLC6A3Q01959 620 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 ROR1Q01973 937 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 CYP27A1Q02318 531 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 PDE4CQ08493 712 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 PTP4A2Q12974 167 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 PPP2R5EQ16537 467 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 PTPN20Q4JDL3 420 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 SLC39A12Q504Y0 691 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 HABP4Q5JVS0 413 aaKnown RBP7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 RTP2Q5QGT7 225 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 TAF3Q5VWG9 929 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 SNX30Q5VWJ9 437 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 DCUN1D2Q6PH85 259 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 NYAP1Q6ZVC0 841 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 STRADAQ7RTN6 431 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 SLFN11Q7Z7L1 901 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 PIGZQ86VD9 579 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 MON1AQ86VX9 555 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 TTC30AQ86WT1 665 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 CEP57Q86XR8 500 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 REXO1L1PQ8IX06 675 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 NUP93Q8N1F7 819 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 ELMOD1Q8N336 334 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 KLHL23Q8NBE8 558 aa7.11□□□□□ -1.27
ATP2B4-206ENST00000466407 OR10T2Q8NGX3 314 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms