RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 WDR83Q9BRX9 315 aaKnown RBP10.91□□□□□ -0.66
UFD1-206ENST00000466373 CXCL16Q9H2A7 254 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 CHMP2BQ9UQN3 213 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.91□□□□□ -0.66
UFD1-206ENST00000466373 BRCA2P51587 3418 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 E5RJQ4 531 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 IGF2BP3O00425 579 aaKnown RBP eCLIP10.91□□□□□ -0.66
UFD1-206ENST00000466373 CILPO75339 1184 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 GSTA1P08263 222 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 CYP2C8P10632 490 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 ARF4P18085 180 aaPredicted RBP10.91□□□□□ -0.66
UFD1-206ENST00000466373 IREB2P48200 963 aaKnown RBP10.91□□□□□ -0.66
UFD1-206ENST00000466373 GCLCP48506 637 aaPredicted RBP10.91□□□□□ -0.66
UFD1-206ENST00000466373 OR6B2Q6IFH4 312 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 SCYL2Q6P3W7 929 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 C1orf228Q6PIY5 440 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 PALM2Q8IXS6 379 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 FBF1Q8TES7 1133 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 KLHL29Q96CT2 875 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 ALG13Q9NP73 1137 aaKnown RBP10.91□□□□□ -0.66
UFD1-206ENST00000466373 GPATCH2LQ9NWQ4 482 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 ERAP1Q9NZ08 941 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 XPO7Q9UIA9 1087 aaKnown RBP10.91□□□□□ -0.66
UFD1-206ENST00000466373 RABGEF1Q9UJ41 708 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 ACTL7BQ9Y614 415 aa10.91□□□□□ -0.66
UFD1-206ENST00000466373 AVILO75366 819 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 GPD2P43304 727 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 NDST1P52848 882 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 ARL4CP56559 192 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 TTLL4Q14679 1199 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 TRNP1Q6NT89 227 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 RIBC1Q8N443 379 aaPredicted RBP10.9□□□□□ -0.66
UFD1-206ENST00000466373 NAT8LQ8N9F0 302 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 NLRP7Q8WX94 980 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 MAF1Q9H063 256 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 PDZD7Q9H5P4 517 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 PSMC3IPQ9P2W1 217 aaPredicted RBP10.9□□□□□ -0.66
UFD1-206ENST00000466373 PRKAG3Q9UGI9 489 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 PHTF1Q9UMS5 762 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.9□□□□□ -0.66
UFD1-206ENST00000466373 A8MUI8 341 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 MCF2LO15068 1137 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 MGRN1O60291 552 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 IL18RAPO95256 599 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 ATP6V1G2O95670 118 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 SLC25A27O95847 323 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 FGFR1P11362 822 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 PDGFRAP16234 1089 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 CYP3A5P20815 502 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 PHKA2P46019 1235 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 GEMIN4P57678 1058 aaKnown RBP10.9□□□□□ -0.66
UFD1-206ENST00000466373 TMEM62Q0P6H9 643 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 SPARCL1Q14515 664 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 HHATQ5VTY9 493 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 DARS2Q6PI48 645 aaKnown RBP10.9□□□□□ -0.66
UFD1-206ENST00000466373 ILDR2Q71H61 639 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 ERO1BQ86YB8 467 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 IGDCC3Q8IVU1 814 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 PLCD3Q8N3E9 789 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 CCDC33Q8N5R6 958 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 ANKLE1Q8NAG6 615 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 DENND1AQ8TEH3 1009 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 PAFAH2Q99487 392 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 NOD2Q9HC29 1040 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 PRMT7Q9NVM4 692 aaPredicted RBP10.9□□□□□ -0.66
UFD1-206ENST00000466373 HEY1Q9Y5J3 304 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 TRIP11Q15643 1979 aa10.9□□□□□ -0.66
UFD1-206ENST00000466373 DNAJC25-GNG10A0A024R161 153 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 TRUB2O95900 331 aaKnown RBP10.9□□□□□ -0.67
UFD1-206ENST00000466373 BNIP1Q12981 228 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 TMEM132DQ14C87 1099 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 GALNTL6Q49A17 601 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 FAXCQ5TGI0 409 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 LVRNQ6Q4G3 990 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 EXOC8Q8IYI6 725 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 CXorf38Q8TB03 319 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 LRRC8CQ8TDW0 803 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 FNIP1Q8TF40 1166 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 RXFP2Q8WXD0 754 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 RXFP1Q9HBX9 757 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 UBN1Q9NPG3 1134 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 FAM49BQ9NUQ9 324 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 TSPAN16Q9UKR8 245 aa10.9□□□□□ -0.67
UFD1-206ENST00000466373 LGALS2P05162 132 aa10.89□□□□□ -0.67
UFD1-206ENST00000466373 KRT16P08779 473 aa10.89□□□□□ -0.67
UFD1-206ENST00000466373 ADRA1DP25100 572 aa10.89□□□□□ -0.67
UFD1-206ENST00000466373 MKRN3Q13064 507 aaKnown RBP10.89□□□□□ -0.67
UFD1-206ENST00000466373 ZNF268Q14587 947 aaPredicted RBP10.89□□□□□ -0.67
UFD1-206ENST00000466373 AMHR2Q16671 573 aa10.89□□□□□ -0.67
UFD1-206ENST00000466373 CCDC142Q17RM4 750 aa10.89□□□□□ -0.67
UFD1-206ENST00000466373 SWT1Q5T5J6 900 aaKnown RBP10.89□□□□□ -0.67
UFD1-206ENST00000466373 FAM183BPQ6ZVS7 135 aa10.89□□□□□ -0.67
UFD1-206ENST00000466373 ARMCX2Q7L311 632 aa10.89□□□□□ -0.67
UFD1-206ENST00000466373 PDIK1LQ8N165 341 aa10.89□□□□□ -0.67
UFD1-206ENST00000466373 ATP11CQ8NB49 1132 aa10.89□□□□□ -0.67
UFD1-206ENST00000466373 TTC13Q8NBP0 860 aa10.89□□□□□ -0.67
UFD1-206ENST00000466373 CMASQ8NFW8 434 aaPredicted RBP10.89□□□□□ -0.67
UFD1-206ENST00000466373 AFG1LQ8WV93 481 aa10.89□□□□□ -0.67
UFD1-206ENST00000466373 OPTNQ96CV9 577 aa10.89□□□□□ -0.67
UFD1-206ENST00000466373 LPIN3Q9BQK8 851 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms