RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 OR10T2Q8NGX3 314 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 ZNF653Q96CK0 615 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 FEZ2Q9UHY8 353 aaPredicted RBP19.63■□□□□ 0.73
CAPN3-209ENST00000466222 TMEM189-UBE2V1I3L0A0 370 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 KCNK3O14649 394 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 CYP11A1P05108 521 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 CARSP49589 748 aaKnown RBP19.62■□□□□ 0.73
CAPN3-209ENST00000466222 GPC5P78333 572 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 CYP4A22Q5TCH4 519 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 TRIM72Q6ZMU5 477 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 PAQR9Q6ZVX9 377 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 IQCKQ8N0W5 287 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 TMEM35BQ8NCS4 154 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 TPCN2Q8NHX9 752 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 ZIM3Q96PE6 472 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 CPXM1Q96SM3 734 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 RASSF4Q9H2L5 321 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 ADAM22Q9P0K1 906 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 NFU1Q9UMS0 254 aa19.62■□□□□ 0.73
CAPN3-209ENST00000466222 TTC3P53804 2025 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 MMP8P22894 467 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 CDH5P33151 784 aaPredicted RBP19.61■□□□□ 0.73
CAPN3-209ENST00000466222 LHX1P48742 406 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 IRAK1P51617 712 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 PTPN20Q4JDL3 420 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 FAM171A1Q5VUB5 890 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 OVOS1Q6IE37 1185 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 LRRTM3Q86VH5 581 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 FUKQ8N0W3 1084 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 ZBTB9Q96C00 473 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 BTBD6Q96KE9 485 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 SYT15Q9BQS2 421 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 RHOBTB2Q9BYZ6 727 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 TRIM7Q9C029 511 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 LHX5Q9H2C1 402 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 TMLHEQ9NVH6 421 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 CNOT8Q9UFF9 292 aaKnown RBP19.61■□□□□ 0.73
CAPN3-209ENST00000466222 KIAA1257Q9ULG3 409 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 PGRMC1O00264 195 aaKnown RBP19.61■□□□□ 0.73
CAPN3-209ENST00000466222 BAIAP3O94812 1187 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 OR4Q2P0C623 313 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 HSPA9P38646 679 aaKnown RBP19.61■□□□□ 0.73
CAPN3-209ENST00000466222 RGS7P49802 495 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 PKDCCQ504Y2 493 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 DNAJC21Q5F1R6 531 aaKnown RBP19.61■□□□□ 0.73
CAPN3-209ENST00000466222 EMC10Q5UCC4 262 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 RASGEF1CQ8N431 466 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 CASKIN2Q8WXE0 1202 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 TNIP3Q96KP6 325 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 PCDHB8Q9UN66 801 aa19.61■□□□□ 0.73
CAPN3-209ENST00000466222 MRPL42Q9Y6G3 142 aaKnown RBP19.61■□□□□ 0.73
CAPN3-209ENST00000466222 BHMG1C9JSJ3 638 aaPredicted RBP19.6■□□□□ 0.73
CAPN3-209ENST00000466222 EIF3HO15372 352 aaKnown RBP eCLIP19.6■□□□□ 0.73
CAPN3-209ENST00000466222 BEST1O76090 585 aa19.6■□□□□ 0.73
CAPN3-209ENST00000466222 LSM8O95777 96 aaKnown RBP19.6■□□□□ 0.73
CAPN3-209ENST00000466222 ALDH7A1P49419 539 aaKnown RBP19.6■□□□□ 0.73
CAPN3-209ENST00000466222 YWHAHQ04917 246 aaPredicted RBP19.6■□□□□ 0.73
CAPN3-209ENST00000466222 PDE4CQ08493 712 aa19.6■□□□□ 0.73
CAPN3-209ENST00000466222 BTG3Q14201 252 aaPredicted RBP19.6■□□□□ 0.73
CAPN3-209ENST00000466222 SPOUT1Q5T280 376 aaKnown RBP19.6■□□□□ 0.73
CAPN3-209ENST00000466222 ARHGAP17Q68EM7 881 aa19.6■□□□□ 0.73
CAPN3-209ENST00000466222 PMF1Q6P1K2 205 aa19.6■□□□□ 0.73
CAPN3-209ENST00000466222 LRIG3Q6UXM1 1119 aa19.6■□□□□ 0.73
CAPN3-209ENST00000466222 PHF13Q86YI8 300 aaPredicted RBP19.6■□□□□ 0.73
CAPN3-209ENST00000466222 RFFLQ8WZ73 363 aa19.6■□□□□ 0.73
CAPN3-209ENST00000466222 PCED1BQ96HM7 432 aa19.6■□□□□ 0.73
CAPN3-209ENST00000466222 YME1L1Q96TA2 773 aa19.6■□□□□ 0.73
CAPN3-209ENST00000466222 COLEC11Q9BWP8 271 aa19.6■□□□□ 0.73
CAPN3-209ENST00000466222 CTTNBP2NLQ9P2B4 639 aa19.6■□□□□ 0.73
CAPN3-209ENST00000466222 RSPH14Q9UHP6 348 aa19.6■□□□□ 0.73
CAPN3-209ENST00000466222 PACSIN2Q9UNF0 486 aaPredicted RBP19.6■□□□□ 0.73
CAPN3-209ENST00000466222 NCANO14594 1321 aa19.6■□□□□ 0.73
CAPN3-209ENST00000466222 PDCD11Q14690 1871 aaKnown RBP19.6■□□□□ 0.73
CAPN3-209ENST00000466222 CHD7Q9P2D1 2997 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 RAD51CO43502 376 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 EFCAB14O75071 495 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 GABBR2O75899 941 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 CYP1A2P05177 515 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 CACNA2D1P54289 1103 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 MRPS25P82663 173 aaKnown RBP19.59■□□□□ 0.73
CAPN3-209ENST00000466222 PDCLQ13371 301 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 COL4A6Q14031 1691 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 TTMPQ5BVD1 217 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 FUT10Q6P4F1 479 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 PEX26Q7Z412 305 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 ERICH1Q86X53 443 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 METTL23Q86XA0 190 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 IFT81Q8WYA0 676 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 HINFPQ9BQA5 517 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 NUP85Q9BW27 656 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 VN1R3Q9BXE9 311 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 B3GNT5Q9BYG0 378 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 SLITRK6Q9H5Y7 841 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 TMEM30AQ9NV96 361 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 CEP83Q9Y592 693 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 ERBB2P04626 1255 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 FAM163BP0C2L3 166 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 CLUL1Q15846 466 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 RTP2Q5QGT7 225 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 CPNE8Q86YQ8 564 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms