RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 TMEM63AO94886 807 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 ITGAVP06756 1048 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 ARF4P18085 180 aaPredicted RBP17.13■□□□□ 0.33
SLX4-202ENST00000466154 GPX6P59796 221 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 TMEM132DQ14C87 1099 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 LRRC38Q5VT99 294 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 RXFP2Q8WXD0 754 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 IFT122Q9HBG6 1241 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 PHTF1Q9UMS5 762 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 SNX9Q9Y5X1 595 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 PARP14Q460N5 1801 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 CHUKO15111 745 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 GHRP10912 638 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 YARSP54577 528 aaKnown RBP17.12■□□□□ 0.33
SLX4-202ENST00000466154 SPARCL1Q14515 664 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 KIZQ2M2Z5 673 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 CGB2Q6NT52 195 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 ACOT1Q86TX2 421 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 PPIL6Q8IXY8 311 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 NETO2Q8NC67 525 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 LGALS13Q9UHV8 139 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 TSPAN16Q9UKR8 245 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 IKBKGQ9Y6K9 419 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 MCM3APO60318 1980 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 PRPSAP2O60256 369 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 RPSAP08865 295 aaKnown RBP17.12■□□□□ 0.33
SLX4-202ENST00000466154 COPS2P61201 443 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 PLPPR4Q7Z2D5 763 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 ERO1BQ86YB8 467 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 SCUBE3Q8IX30 993 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 PDIK1LQ8N165 341 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 P3H4Q92791 437 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 PTPRHQ9HD43 1115 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 PSMC3IPQ9P2W1 217 aaPredicted RBP17.12■□□□□ 0.33
SLX4-202ENST00000466154 GRID1Q9ULK0 1009 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 L3MBTL1Q9Y468 752 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 PPP2R3BQ9Y5P8 575 aa17.12■□□□□ 0.33
SLX4-202ENST00000466154 SYNJ2BP-COX16A0A087WUM0 186 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 C3orf70A6NLC5 250 aaPredicted RBP17.11■□□□□ 0.33
SLX4-202ENST00000466154 HCRTO43612 131 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 ADCYAP1R1P41586 468 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 MSH2P43246 934 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 SLC10A6Q3KNW5 377 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 ZC3H12AQ5D1E8 599 aaKnown RBP17.11■□□□□ 0.33
SLX4-202ENST00000466154 ARMCX2Q7L311 632 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 SLC35B2Q8TB61 432 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 FAF2Q96CS3 445 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 ERP27Q96DN0 273 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 PEBP4Q96S96 227 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 PAFAH2Q99487 392 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 COX16Q9P0S2 106 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 SLC12A4Q9UP95 1085 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 DRG1Q9Y295 367 aaKnown RBP17.11■□□□□ 0.33
SLX4-202ENST00000466154 XRCC4Q13426 336 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 NKD2Q969F2 451 aaPredicted RBP17.11■□□□□ 0.33
SLX4-202ENST00000466154 TMEM237Q96Q45 408 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 B3GNT5Q9BYG0 378 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 PRMT7Q9NVM4 692 aaPredicted RBP17.11■□□□□ 0.33
SLX4-202ENST00000466154 TNFSF13BQ9Y275 285 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 CLUHO75153 1309 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 A0A0G2JLL6 359 aaPredicted RBP17.11■□□□□ 0.33
SLX4-202ENST00000466154 KCNN4O15554 427 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 DNAJC8O75937 253 aaPredicted RBP17.11■□□□□ 0.33
SLX4-202ENST00000466154 SLC25A27O95847 323 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 LGALS2P05162 132 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 ADRA1DP25100 572 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 GEMIN4P57678 1058 aaKnown RBP17.11■□□□□ 0.33
SLX4-202ENST00000466154 NCALDP61601 193 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 ROR1Q01973 937 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 MGAT5Q09328 741 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 CEP128Q6ZU80 1094 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 FAM183BPQ6ZVS7 135 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 PRRT2Q7Z6L0 340 aaPredicted RBP17.11■□□□□ 0.33
SLX4-202ENST00000466154 ECHDC2Q86YB7 292 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 PDZD7Q9H5P4 517 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 ETNK1Q9HBU6 452 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 NPHS2Q9NP85 383 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 RAB6BQ9NRW1 208 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 ASNSD1Q9NWL6 643 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 SHOC2Q9UQ13 582 aa17.11■□□□□ 0.33
SLX4-202ENST00000466154 ALOX15BO15296 676 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 CILPO75339 1184 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 C22orf31O95567 290 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 PDGFRBP09619 1106 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 TARSP26639 723 aaKnown RBP17.1■□□□□ 0.33
SLX4-202ENST00000466154 PHBP35232 272 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 GOLGA7BQ2TAP0 167 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 FAM228AQ86W67 206 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 ANKRD13AQ8IZ07 590 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 ATP11CQ8NB49 1132 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 TACO1Q9BSH4 297 aaKnown RBP17.1■□□□□ 0.33
SLX4-202ENST00000466154 NOD2Q9HC29 1040 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 DPP3Q9NY33 737 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 NR2E3Q9Y5X4 410 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 IGKV6-21A0A0C4DH24 114 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 GAS2O43903 313 aaKnown RBP17.1■□□□□ 0.33
SLX4-202ENST00000466154 IL18RAPO95256 599 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 P4HA1P13674 534 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 PROZP22891 400 aa17.1■□□□□ 0.33
SLX4-202ENST00000466154 ELK3P41970 407 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms