RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 C12orf56Q8IXR9 622 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 ARL14EPQ8N8R7 260 aaPredicted RBP13.68□□□□□ -0.22
SRM-203ENST00000465788 SH3RF2Q8TEC5 729 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 SYAP1Q96A49 352 aaPredicted RBP13.68□□□□□ -0.22
SRM-203ENST00000465788 DHX58Q96C10 678 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 ZC3H10Q96K80 434 aaKnown RBP13.68□□□□□ -0.22
SRM-203ENST00000465788 SLITRK1Q96PX8 696 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 ELOVL4Q9GZR5 314 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 AGPAT3Q9NRZ7 376 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 FAM13BQ9NYF5 915 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 EBF1Q9UH73 591 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 OTOL1A6NHN0 477 aaPredicted RBP13.67□□□□□ -0.22
SRM-203ENST00000465788 RHOBTB1O94844 696 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 APBB3O95704 486 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 ZNF806P0C7X5 589 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 DLATP10515 647 aaKnown RBP13.67□□□□□ -0.22
SRM-203ENST00000465788 BDNFP23560 247 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 RAP1GAPP47736 663 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 PSMC1P62191 440 aaKnown RBP13.67□□□□□ -0.22
SRM-203ENST00000465788 SLC7A9P82251 487 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 CYP24A1Q07973 514 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 ELF2Q15723 593 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 AASDHQ4L235 1098 aaPredicted RBP13.67□□□□□ -0.22
SRM-203ENST00000465788 TDRD10Q5VZ19 366 aaKnown RBP13.67□□□□□ -0.22
SRM-203ENST00000465788 STKLD1Q8NE28 680 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 PDZD8Q8NEN9 1154 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 PCED1BQ96HM7 432 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 CRTAC1Q9NQ79 661 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 C2orf42Q9NWW7 574 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 WNT6Q9Y6F9 365 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 EML5Q05BV3 1969 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 KIAA1549LQ6ZVL6 1849 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 DNAH14Q0VDD8 3507 aa13.67□□□□□ -0.22
SRM-203ENST00000465788 PTPRJQ12913 1337 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 MYO16Q9Y6X6 1858 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 DCDC2BA2VCK2 349 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 ATP2C2O75185 946 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 RTN3O95197 1032 aaPredicted RBP13.66□□□□□ -0.22
SRM-203ENST00000465788 PDGFRBP09619 1106 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 TRIM21P19474 475 aaKnown RBP13.66□□□□□ -0.22
SRM-203ENST00000465788 LMO2P25791 158 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 CYP2J2P51589 502 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 DMC1Q14565 340 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 BMT2Q1RMZ1 405 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 WDR72Q3MJ13 1102 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 HSF5Q4G112 596 aaPredicted RBP13.66□□□□□ -0.22
SRM-203ENST00000465788 HSCBQ8IWL3 235 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 OR6B3Q8NGW1 331 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 RPLP0P6Q8NHW5 317 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 OVCA2Q8WZ82 227 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 CHFRQ96EP1 664 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 SLC22A12Q96S37 553 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 CYP2S1Q96SQ9 504 aa13.66□□□□□ -0.22
SRM-203ENST00000465788 C2orf78A6NCI8 922 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 TGFB1I1O43294 461 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 PHACTR2O75167 634 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 ADRB1P08588 477 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 PTPN1P18031 435 aaKnown RBP13.65□□□□□ -0.22
SRM-203ENST00000465788 HOXD13P35453 343 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 EIF2DP41214 584 aaKnown RBP13.65□□□□□ -0.22
SRM-203ENST00000465788 EHHADHQ08426 723 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 PSMD2Q13200 908 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 KNOP1Q1ED39 458 aaKnown RBP13.65□□□□□ -0.22
SRM-203ENST00000465788 PREPLQ4J6C6 727 aaPredicted RBP13.65□□□□□ -0.22
SRM-203ENST00000465788 MDH1BQ5I0G3 518 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 PPM1JQ5JR12 505 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 PKN3Q6P5Z2 889 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 SHC4Q6S5L8 630 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 CEP57L1Q8IYX8 460 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 RDH13Q8NBN7 331 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 GLIS3Q8NEA6 775 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 TTC16Q8NEE8 873 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 RIN3Q8TB24 985 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 SCFD1Q8WVM8 642 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 CCDC127Q96BQ5 260 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 TNIP3Q96KP6 325 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 ARRDC1-AS1Q9H2J1 176 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 VRTNQ9H8Y1 702 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 VPS45Q9NRW7 570 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 COMMD8Q9NX08 183 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 TBC1D14Q9P2M4 693 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 TFIP11Q9UBB9 837 aaKnown RBP13.65□□□□□ -0.22
SRM-203ENST00000465788 CFAP45Q9UL16 551 aa13.65□□□□□ -0.22
SRM-203ENST00000465788 EPG5Q9HCE0 2579 aa13.64□□□□□ -0.23
SRM-203ENST00000465788 ZNF840PA6NDX5 716 aa13.64□□□□□ -0.23
SRM-203ENST00000465788 A8MXQ7 604 aa13.64□□□□□ -0.23
SRM-203ENST00000465788 F8VP50 259 aa13.64□□□□□ -0.23
SRM-203ENST00000465788 LEFTY2O00292 366 aa13.64□□□□□ -0.23
SRM-203ENST00000465788 CLIC2O15247 247 aa13.64□□□□□ -0.23
SRM-203ENST00000465788 POLR2DO15514 142 aaKnown RBP13.64□□□□□ -0.23
SRM-203ENST00000465788 HCRTO43612 131 aa13.64□□□□□ -0.23
SRM-203ENST00000465788 EXOC3O60645 756 aa13.64□□□□□ -0.23
SRM-203ENST00000465788 OLFM2O95897 454 aa13.64□□□□□ -0.23
SRM-203ENST00000465788 ADH1CP00326 375 aa13.64□□□□□ -0.23
SRM-203ENST00000465788 HSP90AA1P07900 732 aaKnown RBP13.64□□□□□ -0.23
SRM-203ENST00000465788 P4HA1P13674 534 aa13.64□□□□□ -0.23
SRM-203ENST00000465788 PXNP49023 591 aaPredicted RBP13.64□□□□□ -0.23
SRM-203ENST00000465788 MRPS21P82921 87 aaKnown RBP13.64□□□□□ -0.23
SRM-203ENST00000465788 CCDC142Q17RM4 750 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms