RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 GJB3O75712 270 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 CD2BP2O95400 341 aaKnown RBP10.49□□□□□ -0.73
USP39-212ENST00000465514 NFICP08651 508 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 ODC1P11926 461 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 CDC25CP30307 473 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 NMT1P30419 496 aaKnown RBP10.49□□□□□ -0.73
USP39-212ENST00000465514 AVPR1AP37288 418 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 BFSP1Q12934 665 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 SLC14A1Q13336 389 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 PDGFRLQ15198 375 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 CRY1Q16526 586 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 SPDYCQ5MJ68 293 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 C9orf57Q5W0N0 161 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 CC2D1AQ6P1N0 951 aaPredicted RBP10.49□□□□□ -0.73
USP39-212ENST00000465514 SLC39A4Q6P5W5 647 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 TMEM92Q6UXU6 159 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 TMPRSS7Q7RTY8 843 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 ITIH5Q86UX2 942 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 CD302Q8IX05 232 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 DEFB119Q8N690 84 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 SPRYD3Q8NCJ5 442 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 LSM14AQ8ND56 463 aaKnown RBP10.49□□□□□ -0.73
USP39-212ENST00000465514 WHAMMQ8TF30 809 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 RAD54LQ92698 747 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 ECT2Q9H8V3 914 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 IL21Q9HBE4 155 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 BCCIPQ9P287 314 aaKnown RBP eCLIP10.49□□□□□ -0.73
USP39-212ENST00000465514 CPSF3Q9UKF6 684 aaKnown RBP10.49□□□□□ -0.73
USP39-212ENST00000465514 COL5A1P20908 1838 aaPredicted RBP10.49□□□□□ -0.73
USP39-212ENST00000465514 MYOFQ9NZM1 2061 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 KNTC1P50748 2209 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 ANO9A1A5B4 782 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 PIRO00625 290 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 CAPN9O14815 690 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 ALDH1A2O94788 518 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 PLCG1P19174 1290 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 PAX3P23760 479 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 LONP1P36776 959 aaKnown RBP10.48□□□□□ -0.73
USP39-212ENST00000465514 ACOT2P49753 483 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 CDR1P51861 262 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 GTF2BQ00403 316 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 CFHR1Q03591 330 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 GRIN1Q05586 938 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 TMEM132DQ14C87 1099 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 MAP7D1Q3KQU3 841 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 ZC2HC1CQ53FD0 456 aaPredicted RBP10.48□□□□□ -0.73
USP39-212ENST00000465514 RABEPKQ7Z6M1 372 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 GLRX5Q86SX6 157 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 MAB21L3Q8N8X9 362 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 OR10T2Q8NGX3 314 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 RASSF8Q8NHQ8 419 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 FCRL3Q96P31 734 aaPredicted RBP10.48□□□□□ -0.73
USP39-212ENST00000465514 FIZ1Q96SL8 496 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 IGSF5Q9NSI5 407 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 TDP1Q9NUW8 608 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 HSFX1Q9UBD0 423 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 METRNQ9UJH8 293 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 SMC3Q9UQE7 1217 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 DERAQ9Y315 318 aa10.48□□□□□ -0.73
USP39-212ENST00000465514 TISP43B9A030 160 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 K7EQS6 105 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 CYB561D2O14569 222 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 AP5Z1O43299 807 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 CBFA2T3O75081 653 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 TBCAO75347 108 aaKnown RBP10.47□□□□□ -0.73
USP39-212ENST00000465514 BMP15O95972 392 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 CYP11A1P05108 521 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 SYPP08247 313 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 ATF6P18850 670 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 TUFMP49411 452 aaKnown RBP10.47□□□□□ -0.73
USP39-212ENST00000465514 RPL6Q02878 288 aaKnown RBP10.47□□□□□ -0.73
USP39-212ENST00000465514 CAMK2BQ13554 666 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 SLC39A12Q504Y0 691 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 ADALQ6DHV7 355 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 TTC16Q8NEE8 873 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 CCDC26Q8TAB7 109 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 HMGB4Q8WW32 186 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 LARP4BQ92615 738 aaKnown RBP10.47□□□□□ -0.73
USP39-212ENST00000465514 ATP2A3Q93084 1043 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 SEPT5Q99719 369 aaPredicted RBP10.47□□□□□ -0.73
USP39-212ENST00000465514 ZCWPW1Q9H0M4 648 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 ASB7Q9H672 318 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 KIF9Q9HAQ2 790 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 DUS2Q9NX74 493 aaKnown RBP10.47□□□□□ -0.73
USP39-212ENST00000465514 AGO2Q9UKV8 859 aaKnown RBP10.47□□□□□ -0.73
USP39-212ENST00000465514 PCOLCE2Q9UKZ9 415 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 WNT6Q9Y6F9 365 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 DOPEY2Q9Y3R5 2298 aa10.47□□□□□ -0.73
USP39-212ENST00000465514 TEP1Q99973 2627 aaKnown RBP10.47□□□□□ -0.73
USP39-212ENST00000465514 FAM149AA5PLN7 773 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 ABCD1P33897 745 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 DDIT3P35638 169 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 MTF1Q14872 753 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 VEPH1Q14D04 833 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 SF3A1Q15459 793 aaKnown RBP10.46□□□□□ -0.73
USP39-212ENST00000465514 MGAT5BQ3V5L5 792 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 SLFN12LQ6IEE8 588 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 PCSK4Q6UW60 755 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 BRAPQ7Z569 592 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 TMEM150AQ86TG1 271 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms