RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 SPATA31A3Q5VYP0 1347 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 ADGRA2Q96PE1 1338 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 FAM170AA1A519 330 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 WDR91A4D1P6 747 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 CCDC154A6NI56 674 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 PRSS47A8MTI9 375 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 BOLA2-SMG1P6H3BVE0 249 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 TSPAN6O43657 245 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 ANXA1P04083 346 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 LPOP22079 712 aaPredicted RBP3.73□□□□□ -1.81
SNX4-202ENST00000465505 IARSP41252 1262 aaKnown RBP3.73□□□□□ -1.81
SNX4-202ENST00000465505 NPTX2P47972 431 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 SLC16A1P53985 500 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 SARNPP82979 210 aaKnown RBP3.73□□□□□ -1.81
SNX4-202ENST00000465505 ZBED6P86452 979 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 TFF2Q03403 129 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 ITIH3Q06033 890 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 COX10Q12887 443 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 BRD3Q15059 726 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 PPP2R5AQ15172 486 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 PREPLQ4J6C6 727 aaPredicted RBP3.73□□□□□ -1.81
SNX4-202ENST00000465505 COBLL1Q53SF7 1204 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 DNAJC21Q5F1R6 531 aaKnown RBP3.73□□□□□ -1.81
SNX4-202ENST00000465505 C10orf62Q5T681 223 aaPredicted RBP3.73□□□□□ -1.81
SNX4-202ENST00000465505 ZNF425Q6IV72 752 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 TAPT1Q6NXT6 567 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 ERAP2Q6P179 960 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 DDX42Q86XP3 938 aaKnown RBP eCLIP3.73□□□□□ -1.81
SNX4-202ENST00000465505 B3GALNT2Q8NCR0 500 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 PPHLN1Q8NEY8 458 aaKnown RBP3.73□□□□□ -1.81
SNX4-202ENST00000465505 HDAC7Q8WUI4 952 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 TSR2Q969E8 191 aaKnown RBP3.73□□□□□ -1.81
SNX4-202ENST00000465505 COA7Q96BR5 231 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 RMDN2Q96LZ7 410 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 TRIB1Q96RU8 372 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 HAPLN3Q96S86 360 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.73□□□□□ -1.816e-6■■■□□ 19.2
SNX4-202ENST00000465505 IQCGQ9H095 443 aaKnown RBP3.73□□□□□ -1.81
SNX4-202ENST00000465505 RPAP3Q9H6T3 665 aaPredicted RBP3.73□□□□□ -1.81
SNX4-202ENST00000465505 CPSF2Q9P2I0 782 aaKnown RBP3.73□□□□□ -1.81
SNX4-202ENST00000465505 SQORQ9Y6N5 450 aa3.73□□□□□ -1.81
SNX4-202ENST00000465505 PRSS29PA6NIE9 313 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 SKAP2O75563 359 aaPredicted RBP3.72□□□□□ -1.81
SNX4-202ENST00000465505 IDEP14735 1019 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 ITGB6P18564 788 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 BTF3P20290 206 aaKnown RBP3.72□□□□□ -1.81
SNX4-202ENST00000465505 DDIT3P35638 169 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 GEMIN4P57678 1058 aaKnown RBP3.72□□□□□ -1.81
SNX4-202ENST00000465505 KRT83P78385 493 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 SSBP2P81877 361 aaPredicted RBP3.72□□□□□ -1.81
SNX4-202ENST00000465505 KIF22Q14807 665 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 ACAP2Q15057 778 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 GRAMD1BQ3KR37 738 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 ARMC3Q5W041 872 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 CFAP161Q6P656 301 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 GADL1Q6ZQY3 521 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 PDSS2Q86YH6 399 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 RASAL3Q86YV0 1011 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 RAVER1Q8IY67 606 aaKnown RBP3.72□□□□□ -1.81
SNX4-202ENST00000465505 Q8N9P0 234 aaPredicted RBP3.72□□□□□ -1.81
SNX4-202ENST00000465505 SEMA6DQ8NFY4 1073 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 TBC1D22AQ8WUA7 517 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 RFKQ969G6 155 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 CCDC34Q96HJ3 373 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 PBKQ96KB5 322 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 GSDMAQ96QA5 445 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 SMOQ99835 787 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 TRIM6Q9C030 488 aaPredicted RBP3.72□□□□□ -1.81
SNX4-202ENST00000465505 AMBRA1Q9C0C7 1298 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 ABCG4Q9H172 646 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 VPS33BQ9H267 617 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 RMI1Q9H9A7 625 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 SH3GLB2Q9NR46 395 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 FLRT1Q9NZU1 646 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 DKK3Q9UBP4 350 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 SEL1LQ9UBV2 794 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 ZNF70Q9UC06 446 aaPredicted RBP3.72□□□□□ -1.81
SNX4-202ENST00000465505 ZMAT5Q9UDW3 170 aaKnown RBP3.72□□□□□ -1.81
SNX4-202ENST00000465505 HDAC9Q9UKV0 1011 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 ZHX1Q9UKY1 873 aaPredicted RBP3.72□□□□□ -1.81
SNX4-202ENST00000465505 TPCN1Q9ULQ1 816 aa3.72□□□□□ -1.81
SNX4-202ENST00000465505 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.72□□□□□ -1.81
SNX4-202ENST00000465505 DDX49Q9Y6V7 483 aaKnown RBP3.72□□□□□ -1.81
SNX4-202ENST00000465505 A0A0B4J269 797 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 SHTN1A0MZ66 631 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 ERICH4A6NGS2 130 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 NT5C1B-RDH14C9J2C7 533 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 F5H697 171 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 GCOM1H8Y6P7 765 aaPredicted RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 FZD9O00144 591 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 F2RL2O00254 374 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 POLRMTO00411 1230 aaKnown RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 FIBPO43427 364 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 MTRF1O75570 445 aaKnown RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 ARIH2O95376 493 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 RHOP08100 348 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 XBP1P17861 261 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 VCAM1P19320 739 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 MALP21145 153 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 OAS2P29728 719 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms