RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 LRRC27Q9C0I9 530 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.06□□□□□ -1.63e-6■■■■□ 24.1
VPS8-217ENST00000465213 SIK2Q9H0K1 926 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 ANLNQ9NQW6 1124 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 ACAD8Q9UKU7 415 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 PCDHA6Q9UN73 950 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 DGKBQ9Y6T7 804 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 MORC2Q9Y6X9 1032 aaPredicted RBP5.06□□□□□ -1.6
VPS8-217ENST00000465213 A0A0B4J269 797 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 WIPF3A6NGB9 483 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 VWC2LB2RUY7 222 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 F5H697 171 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 H3BML4 177 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 MPPED1O15442 326 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 DNAJB5O75953 348 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 GNAI2P04899 355 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 SLC5A1P13866 664 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 HSPA6P17066 643 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 CHRM3P20309 590 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 SERPINB3P29508 390 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 NDUFV1P49821 464 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 GPSM2P81274 684 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 TUBB3Q13509 450 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 GTF2H3Q13889 308 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 PTPRRQ15256 657 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 TAF11Q15544 211 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 COBLL1Q53SF7 1204 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 WDR45BQ5MNZ6 344 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 ZNF788Q6ZQV5 615 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 DENND1CQ8IV53 801 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 CLASRPQ8N2M8 674 aaKnown RBP5.05□□□□□ -1.6
VPS8-217ENST00000465213 BRIX1Q8TDN6 353 aaKnown RBP5.05□□□□□ -1.6
VPS8-217ENST00000465213 IPO4Q8TEX9 1081 aaKnown RBP5.05□□□□□ -1.6
VPS8-217ENST00000465213 TFAP2BQ92481 460 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 DDX17Q92841 729 aaKnown RBP5.05□□□□□ -1.6
VPS8-217ENST00000465213 FBXL20Q96IG2 436 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 PGBD1Q96JS3 809 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 TNIP3Q96KP6 325 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 TAAR9Q96RI9 348 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 ACO2Q99798 780 aaKnown RBP5.05□□□□□ -1.6
VPS8-217ENST00000465213 HEPHQ9BQS7 1158 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 AMBRA1Q9C0C7 1298 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 ARMT1Q9H993 441 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 NMRK2Q9NPI5 230 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 NLRC4Q9NPP4 1024 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 RASSF1Q9NS23 344 aa5.05□□□□□ -1.6
VPS8-217ENST00000465213 NAP1L2Q9ULW6 460 aaPredicted RBP5.05□□□□□ -1.6
VPS8-217ENST00000465213 A0A088AWK7 358 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 PRSS47A8MTI9 375 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 ADM5C9JUS6 153 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 M0QYG6 137 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 PIM1P11309 404 aaPredicted RBP5.04□□□□□ -1.6
VPS8-217ENST00000465213 WT1P19544 449 aaPredicted RBP5.04□□□□□ -1.6
VPS8-217ENST00000465213 HTR1BP28222 390 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 RENBPP51606 427 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 SOX8P57073 446 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 NUCB1Q02818 461 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 MAPK7Q13164 816 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 STK3Q13188 491 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 ELF2Q15723 593 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 KHDC1LQ5JSQ8 128 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 KAZNQ674X7 775 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 C1orf228Q6PIY5 440 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 LVRNQ6Q4G3 990 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 PTF1AQ7RTS3 328 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 NKAPQ8N5F7 415 aaKnown RBP5.04□□□□□ -1.6
VPS8-217ENST00000465213 CAMKK1Q8N5S9 505 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 Q8N9P0 234 aaPredicted RBP5.04□□□□□ -1.6
VPS8-217ENST00000465213 IL17REQ8NFR9 667 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 PPP1R35Q8TAP8 253 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 GOLGA1Q92805 767 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 ZNF622Q969S3 477 aaKnown RBP eCLIP5.04□□□□□ -1.6
VPS8-217ENST00000465213 OSBPL9Q96SU4 736 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 PHTF1Q9UMS5 762 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 SLC45A1Q9Y2W3 748 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.04□□□□□ -1.6
VPS8-217ENST00000465213 ENTPD2Q9Y5L3 495 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 RAD54BQ9Y620 910 aa5.04□□□□□ -1.6
VPS8-217ENST00000465213 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 ABHD14A-ACY1A0A1B0GW23 586 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 WDR27A2RRH5 827 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 APAF1O14727 1248 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 TRIAP1O43715 76 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 NBNO60934 754 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 SOAT2O75908 522 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 UBXN7O94888 489 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 HNRNPCP07910 306 aaKnown RBP eCLIP5.03□□□□□ -1.6
VPS8-217ENST00000465213 CHRM2P08172 466 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 ELFN1P0C7U0 828 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 SETSIPP0DME0 302 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 CTGFP29279 349 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 GCLCP48506 637 aaPredicted RBP5.03□□□□□ -1.6
VPS8-217ENST00000465213 ZNF81P51508 661 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 MAPK10P53779 464 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 NXPH1P58417 271 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 RAB1AP62820 205 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 ITIH3Q06033 890 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 SRSF4Q08170 494 aaKnown RBP5.03□□□□□ -1.6
VPS8-217ENST00000465213 TOMM20Q15388 145 aa5.03□□□□□ -1.6
VPS8-217ENST00000465213 TXNRD1Q16881 649 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms