RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ACKR2O00590 384 aa10.21□□□□□ -0.77
APP-213ENST00000464867 PRPF3O43395 683 aaKnown RBP10.21□□□□□ -0.77
APP-213ENST00000464867 CBFA2T3O75081 653 aa10.21□□□□□ -0.77
APP-213ENST00000464867 OAZ2O95190 189 aa10.21□□□□□ -0.77
APP-213ENST00000464867 STAU1O95793 577 aaKnown RBP10.21□□□□□ -0.77
APP-213ENST00000464867 IL12RB1P42701 662 aa10.21□□□□□ -0.77
APP-213ENST00000464867 CSRP3P50461 194 aa10.21□□□□□ -0.77
APP-213ENST00000464867 SEMG2Q02383 582 aa10.21□□□□□ -0.77
APP-213ENST00000464867 CENPCQ03188 943 aa10.21□□□□□ -0.77
APP-213ENST00000464867 KCNMA1Q12791 1236 aa10.21□□□□□ -0.77
APP-213ENST00000464867 MTF1Q14872 753 aa10.21□□□□□ -0.77
APP-213ENST00000464867 HSF5Q4G112 596 aaPredicted RBP10.21□□□□□ -0.77
APP-213ENST00000464867 NCAPH2Q6IBW4 605 aa10.21□□□□□ -0.77
APP-213ENST00000464867 MARCH9Q86YJ5 346 aa10.21□□□□□ -0.77
APP-213ENST00000464867 TXNDC5Q8NBS9 432 aaKnown RBP10.21□□□□□ -0.77
APP-213ENST00000464867 RHBDD1Q8TEB9 315 aa10.21□□□□□ -0.77
APP-213ENST00000464867 OSCP1Q8WVF1 389 aa10.21□□□□□ -0.77
APP-213ENST00000464867 DYDC2Q96IM9 177 aa10.21□□□□□ -0.77
APP-213ENST00000464867 NACC1Q96RE7 527 aa10.21□□□□□ -0.77
APP-213ENST00000464867 ANKEF1Q9NU02 776 aa10.21□□□□□ -0.77
APP-213ENST00000464867 HSFX1Q9UBD0 423 aa10.21□□□□□ -0.77
APP-213ENST00000464867 BRPF3Q9ULD4 1205 aa10.21□□□□□ -0.77
APP-213ENST00000464867 AK5Q9Y6K8 562 aa10.21□□□□□ -0.77
APP-213ENST00000464867 ATMQ13315 3056 aa10.21□□□□□ -0.78
APP-213ENST00000464867 MUC22E2RYF6 1773 aaPredicted RBP10.21□□□□□ -0.78
APP-213ENST00000464867 DENND4CQ5VZ89 1909 aa10.21□□□□□ -0.78
APP-213ENST00000464867 MGAQ8IWI9 3026 aa10.2□□□□□ -0.78
APP-213ENST00000464867 KLF18A0A0U1RQI7 1052 aa10.2□□□□□ -0.78
APP-213ENST00000464867 TCRBV21S2A2A0A5A6 115 aa10.2□□□□□ -0.78
APP-213ENST00000464867 K7EQS6 105 aa10.2□□□□□ -0.78
APP-213ENST00000464867 CITO14578 2027 aa10.2□□□□□ -0.78
APP-213ENST00000464867 SGSM2O43147 1006 aa10.2□□□□□ -0.78
APP-213ENST00000464867 KLF8O95600 359 aaPredicted RBP10.2□□□□□ -0.78
APP-213ENST00000464867 OR4Q2P0C623 313 aa10.2□□□□□ -0.78
APP-213ENST00000464867 ATXN1LP0C7T5 689 aaKnown RBP10.2□□□□□ -0.78
APP-213ENST00000464867 C6P13671 934 aa10.2□□□□□ -0.78
APP-213ENST00000464867 CHMLP26374 656 aa10.2□□□□□ -0.78
APP-213ENST00000464867 CDC27P30260 824 aa10.2□□□□□ -0.78
APP-213ENST00000464867 ABL2P42684 1182 aa10.2□□□□□ -0.78
APP-213ENST00000464867 RCAN1P53805 252 aa10.2□□□□□ -0.78
APP-213ENST00000464867 CXADRP78310 365 aa10.2□□□□□ -0.78
APP-213ENST00000464867 RHDQ02161 417 aa10.2□□□□□ -0.78
APP-213ENST00000464867 SRSF11Q05519 484 aaKnown RBP10.2□□□□□ -0.78
APP-213ENST00000464867 SOX4Q06945 474 aaPredicted RBP10.2□□□□□ -0.78
APP-213ENST00000464867 SUZ12Q15022 739 aaKnown RBP10.2□□□□□ -0.78
APP-213ENST00000464867 CCDC157Q569K6 752 aa10.2□□□□□ -0.78
APP-213ENST00000464867 CDCA2Q69YH5 1023 aaPredicted RBP10.2□□□□□ -0.78
APP-213ENST00000464867 MAEAQ7L5Y9 396 aa10.2□□□□□ -0.78
APP-213ENST00000464867 ALLCQ8N6M5 410 aa10.2□□□□□ -0.78
APP-213ENST00000464867 ATAD1Q8NBU5 361 aa10.2□□□□□ -0.78
APP-213ENST00000464867 DEPTORQ8TB45 409 aa10.2□□□□□ -0.78
APP-213ENST00000464867 MRPS31Q92665 395 aaKnown RBP10.2□□□□□ -0.78
APP-213ENST00000464867 COL12A1Q99715 3063 aa10.2□□□□□ -0.78
APP-213ENST00000464867 SEPT5Q99719 369 aaPredicted RBP10.2□□□□□ -0.78
APP-213ENST00000464867 CRISPLD1Q9H336 500 aa10.2□□□□□ -0.78
APP-213ENST00000464867 RWDD1Q9H446 243 aaPredicted RBP10.2□□□□□ -0.78
APP-213ENST00000464867 PRM3Q9NNZ6 103 aa10.2□□□□□ -0.78
APP-213ENST00000464867 HELZP42694 1942 aaKnown RBP10.19□□□□□ -0.78
APP-213ENST00000464867 MYMKA6NI61 221 aa10.19□□□□□ -0.78
APP-213ENST00000464867 PLK4O00444 970 aa10.19□□□□□ -0.78
APP-213ENST00000464867 FLRT2O43155 660 aa10.19□□□□□ -0.78
APP-213ENST00000464867 NDUFS2O75306 463 aa10.19□□□□□ -0.78
APP-213ENST00000464867 BAG4O95429 457 aaKnown RBP10.19□□□□□ -0.78
APP-213ENST00000464867 VNN2O95498 520 aa10.19□□□□□ -0.78
APP-213ENST00000464867 CER1O95813 267 aa10.19□□□□□ -0.78
APP-213ENST00000464867 HSPA4P34932 840 aa10.19□□□□□ -0.78
APP-213ENST00000464867 HNF1BP35680 557 aa10.19□□□□□ -0.78
APP-213ENST00000464867 NUCB1Q02818 461 aa10.19□□□□□ -0.78
APP-213ENST00000464867 GRIK2Q13002 908 aa10.19□□□□□ -0.78
APP-213ENST00000464867 MYBPC2Q14324 1141 aa10.19□□□□□ -0.78
APP-213ENST00000464867 ZNF268Q14587 947 aaPredicted RBP10.19□□□□□ -0.78
APP-213ENST00000464867 SMAD1Q15797 465 aaKnown RBP10.19□□□□□ -0.78
APP-213ENST00000464867 MGAT5BQ3V5L5 792 aa10.19□□□□□ -0.78
APP-213ENST00000464867 WDR45BQ5MNZ6 344 aa10.19□□□□□ -0.78
APP-213ENST00000464867 ATF7IP2Q5U623 682 aa10.19□□□□□ -0.78
APP-213ENST00000464867 EEF1DP3Q658K8 133 aa10.19□□□□□ -0.78
APP-213ENST00000464867 IL27RAQ6UWB1 636 aa10.19□□□□□ -0.78
APP-213ENST00000464867 LYPD4Q6UWN0 246 aa10.19□□□□□ -0.78
APP-213ENST00000464867 TAS1R3Q7RTX0 852 aa10.19□□□□□ -0.78
APP-213ENST00000464867 TMPRSS12Q86WS5 348 aa10.19□□□□□ -0.78
APP-213ENST00000464867 TRIML1Q8N9V2 468 aa10.19□□□□□ -0.78
APP-213ENST00000464867 MCPH1Q8NEM0 835 aa10.19□□□□□ -0.78
APP-213ENST00000464867 GTPBP3Q969Y2 492 aaKnown RBP10.19□□□□□ -0.78
APP-213ENST00000464867 HSPA12BQ96MM6 686 aa10.19□□□□□ -0.78
APP-213ENST00000464867 LPIN3Q9BQK8 851 aa10.19□□□□□ -0.78
APP-213ENST00000464867 TIMMDC1Q9NPL8 285 aa10.19□□□□□ -0.78
APP-213ENST00000464867 SH3GLB2Q9NR46 395 aa10.19□□□□□ -0.78
APP-213ENST00000464867 VPS54Q9P1Q0 977 aa10.19□□□□□ -0.78
APP-213ENST00000464867 DOLKQ9UPQ8 538 aa10.19□□□□□ -0.78
APP-213ENST00000464867 DOPEY2Q9Y3R5 2298 aa10.19□□□□□ -0.78
APP-213ENST00000464867 MTMR11A4FU01 709 aa10.18□□□□□ -0.78
APP-213ENST00000464867 SGK1O00141 431 aa10.18□□□□□ -0.78
APP-213ENST00000464867 SLC27A2O14975 620 aa10.18□□□□□ -0.78
APP-213ENST00000464867 SLC37A4O43826 429 aa10.18□□□□□ -0.78
APP-213ENST00000464867 USO1O60763 962 aaKnown RBP10.18□□□□□ -0.78
APP-213ENST00000464867 ZNF217O75362 1048 aa10.18□□□□□ -0.78
APP-213ENST00000464867 SOAT2O75908 522 aa10.18□□□□□ -0.78
APP-213ENST00000464867 DKK1O94907 266 aa10.18□□□□□ -0.78
APP-213ENST00000464867 SLITRK3O94933 977 aa10.18□□□□□ -0.78
APP-213ENST00000464867 NFATC1O95644 943 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms