RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 HTRA4P83105 476 aaPredicted RBP7.2□□□□□ -1.26
PTCD3-205ENST00000464541 ZNF543Q08ER8 600 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 EIF2B5Q13144 721 aaKnown RBP7.2□□□□□ -1.26
PTCD3-205ENST00000464541 CCNIQ14094 377 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 NPY5RQ15761 445 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 STRIP1Q5VSL9 837 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 ANKRD16Q6P6B7 361 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 UNC13DQ70J99 1090 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 ABRAQ8N0Z2 381 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 SOCS4Q8WXH5 440 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 RSPRY1Q96DX4 576 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 UROC1Q96N76 676 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 DKK3Q9UBP4 350 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 ZNHIT2Q9UHR6 403 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 PADI4Q9UM07 663 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 CAPN11Q9UMQ6 739 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 CORO2BQ9UQ03 480 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 LINC00473A8K010 186 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 F8W8V4 182 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 KIAA0355O15063 1070 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 THAP12O43422 761 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 RRP9O43818 475 aaKnown RBP7.19□□□□□ -1.26
PTCD3-205ENST00000464541 PDHA1P08559 390 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 IL6RP08887 468 aaPredicted RBP7.19□□□□□ -1.26
PTCD3-205ENST00000464541 IL1R2P27930 398 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 PCSK6P29122 969 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 PRKAR1BP31321 381 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 BCAT1P54687 386 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 PICALMQ13492 652 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 SMN1Q16637 294 aaKnown RBP7.19□□□□□ -1.26
PTCD3-205ENST00000464541 TREML2Q5T2D2 321 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 DPP9Q86TI2 863 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 IZUMO1Q8IYV9 350 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 RP9Q8TA86 221 aaKnown RBP7.19□□□□□ -1.26
PTCD3-205ENST00000464541 GLG1Q92896 1179 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 IQCDQ96DY2 449 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 ZNF668Q96K58 619 aaPredicted RBP7.19□□□□□ -1.26
PTCD3-205ENST00000464541 ZNF212Q9UDV6 495 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 MID2Q9UJV3 735 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 ITGB1BP2Q9UKP3 347 aa7.19□□□□□ -1.26
PTCD3-205ENST00000464541 A1L4Q6 167 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 CLCA1A8K7I4 914 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 TJP3O95049 919 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 BTF3P20290 206 aaKnown RBP7.18□□□□□ -1.26
PTCD3-205ENST00000464541 TM4SF4P48230 202 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 PTDSS1P48651 473 aaKnown RBP7.18□□□□□ -1.26
PTCD3-205ENST00000464541 ZNF750Q32MQ0 723 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 FAM153CQ494X1 144 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 FCRL6Q6DN72 434 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 MZT2AQ6P582 158 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 RNF44Q7L0R7 432 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 ATP11CQ8NB49 1132 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 NELL1Q92832 810 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 NAA15Q9BXJ9 866 aaKnown RBP7.18□□□□□ -1.26
PTCD3-205ENST00000464541 ZCWPW1Q9H0M4 648 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 RIOX1Q9H6W3 641 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 STARD7Q9NQZ5 370 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 DKK4Q9UBT3 224 aa7.18□□□□□ -1.26
PTCD3-205ENST00000464541 H7C4K7 107 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 MGST3O14880 152 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 PLIN1O60240 522 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 RASAL1O95294 804 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 NUDT3O95989 172 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 PRKCBP05771 671 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 NDUFB7P17568 137 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 TPH1P17752 444 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 BMP5P22003 454 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 EPHA3P29320 983 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 LIPAP38571 399 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 CLK3P49761 638 aaKnown RBP7.17□□□□□ -1.26
PTCD3-205ENST00000464541 ELLP55199 621 aaPredicted RBP7.17□□□□□ -1.26
PTCD3-205ENST00000464541 SP2Q02086 613 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 DEPDC1Q5TB30 811 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 CACHD1Q5VU97 1274 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 MTHFD1LQ6UB35 978 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 PRIMA1Q86XR5 153 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 RAB11FIP4Q86YS3 637 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 ZG16BQ96DA0 208 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 HAPLN3Q96S86 360 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 GBA2Q9HCG7 927 aaPredicted RBP7.17□□□□□ -1.26
PTCD3-205ENST00000464541 SEMA4GQ9NTN9 838 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 GABRQQ9UN88 632 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 SNX14Q9Y5W7 946 aa7.17□□□□□ -1.26
PTCD3-205ENST00000464541 POM121BA6NF01 834 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 RAB27BO00194 218 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 AREL1O15033 823 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 KPNA5O15131 536 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 CD3EAPO15446 510 aaKnown RBP7.16□□□□□ -1.26
PTCD3-205ENST00000464541 RGS10O43665 173 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 SRGAP2O75044 1071 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 PIAS2O75928 621 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 A1BGP04217 495 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 DLDP09622 509 aaKnown RBP7.16□□□□□ -1.26
PTCD3-205ENST00000464541 ELFN1P0C7U0 828 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 TSHRP16473 764 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 ADORA2AP29274 412 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 PRIM2P49643 509 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 CCT8P50990 548 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 CLCN2P51788 898 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms