RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 KCNJ1P48048 391 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 IRAK1P51617 712 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 PLTPP55058 493 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 TAS2R40P59535 323 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 SPDYCQ5MJ68 293 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 FOXR1Q6PIV2 292 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 LIMS2Q7Z4I7 341 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 CCDC105Q8IYK2 499 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 OR6B3Q8NGW1 331 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 KBTBD7Q8WVZ9 684 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 MRPL47Q9HD33 250 aaKnown RBP15.29■□□□□ 0.04
COL5A1-205ENST00000464187 PRDM5Q9NQX1 630 aaPredicted RBP15.29■□□□□ 0.04
COL5A1-205ENST00000464187 ATP8A1Q9Y2Q0 1164 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 NME7Q9Y5B8 376 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 SCINQ9Y6U3 715 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 TRIM43BA6NCK2 446 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 GOLGA6L10A6NI86 522 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 O00370 1275 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 CYB561D2O14569 222 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 PSTPIP1O43586 416 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 B3GAT3O94766 335 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 MYZAPP0CAP1 466 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 EN2P19622 333 aaPredicted RBP15.29■□□□□ 0.04
COL5A1-205ENST00000464187 MMP8P22894 467 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 ITGB8P26012 769 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 GBP1P32455 592 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 ATP1A2P50993 1020 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 GNGT1P63211 74 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 SGO2Q562F6 1265 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 EMC10Q5UCC4 262 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 DPH6Q7L8W6 267 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 ABI1Q8IZP0 508 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 TOP6BLQ8N6T0 577 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 URGCPQ8TCY9 931 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 C1orf54Q8WWF1 131 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 TRIM43Q96BQ3 446 aaPredicted RBP15.29■□□□□ 0.04
COL5A1-205ENST00000464187 HEXIM2Q96MH2 286 aaKnown RBP15.29■□□□□ 0.04
COL5A1-205ENST00000464187 EPB41L4BQ9H329 900 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 KANSL3Q9P2N6 904 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 LRFN2Q9ULH4 789 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 PCDHGC3Q9UN70 934 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 TANC1Q9C0D5 1861 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 A8MXQ7 604 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 MED7O43513 233 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 TIMP1P01033 207 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 VDRP11473 427 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 PAN2Q504Q3 1202 aaKnown RBP15.28■□□□□ 0.04
COL5A1-205ENST00000464187 TTC19Q6DKK2 380 aaPredicted RBP15.28■□□□□ 0.04
COL5A1-205ENST00000464187 UNC93AQ86WB7 457 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 ZNF280BQ86YH2 543 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 ADGRF2Q8IZF7 708 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 CRIPAKQ8N1N5 446 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 SLCO2A1Q92959 643 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 VWCEQ96DN2 955 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 SENP8Q96LD8 212 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 UROC1Q96N76 676 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 LRRC4CQ9HCJ2 640 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 TBC1D13Q9NVG8 400 aa15.28■□□□□ 0.04
COL5A1-205ENST00000464187 CWC15Q9P013 229 aaKnown RBP15.28■□□□□ 0.04
COL5A1-205ENST00000464187 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.28■□□□□ 0.04
COL5A1-205ENST00000464187 SCN5AQ14524 2016 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 EIF3HO15372 352 aaKnown RBP eCLIP15.27■□□□□ 0.04
COL5A1-205ENST00000464187 HCRTO43612 131 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 B4GALT3O60512 393 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 DDHD2O94830 711 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 ECEL1O95672 775 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 LSM8O95777 96 aaKnown RBP15.27■□□□□ 0.04
COL5A1-205ENST00000464187 LMO2P25791 158 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 MAN1A1P33908 653 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 RFC2P35250 354 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 GNL1P36915 607 aaPredicted RBP15.27■□□□□ 0.04
COL5A1-205ENST00000464187 RNASELQ05823 741 aaKnown RBP15.27■□□□□ 0.04
COL5A1-205ENST00000464187 DSC1Q08554 894 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 PDCLQ13371 301 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 IKBKEQ14164 716 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 CNKSR3Q6P9H4 555 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 DSTYKQ6XUX3 929 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 ACOT1Q86TX2 421 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 RHOT1Q8IXI2 618 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 C12orf29Q8N999 325 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.27■□□□□ 0.04
COL5A1-205ENST00000464187 FEZF2Q8TBJ5 459 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 SNX25Q9H3E2 840 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 CHST7Q9NS84 486 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 PARVAQ9NVD7 372 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 KIAA1257Q9ULG3 409 aa15.27■□□□□ 0.04
COL5A1-205ENST00000464187 TCRBV5S1A1TA0A578 114 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 KIAA0355O15063 1070 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 PDGFRBP09619 1106 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 RAG1P15918 1043 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 PMS2P54278 862 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 SNX1Q13596 522 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 TIGD5Q53EQ6 642 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 AGBL2Q5U5Z8 902 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 WSCD1Q658N2 575 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 UBE2Q1Q7Z7E8 422 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 KATNAL2Q8IYT4 538 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 TMEM35BQ8NCS4 154 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 HASPINQ8TF76 798 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 MAIP1Q8WWC4 291 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms