RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.97□□□□□ -0.17
CHRNA4-202ENST00000463705 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 F5H5T6 163 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 GLRA3O75311 464 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 VTNP04004 478 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 TGM2P21980 687 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 PPATQ06203 517 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 DDR1Q08345 913 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 ZNF177Q13360 481 aaPredicted RBP13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 RPAINQ86UA6 219 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 OTUB1Q96FW1 271 aaPredicted RBP13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 CDK5RAP1Q96SZ6 601 aaKnown RBP13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 ASB7Q9H672 318 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 TEKT2Q9UIF3 430 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 TRPC5OSA6NMA1 111 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 WNT10BO00744 389 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 HDAC4P56524 1084 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 GLRA4Q5JXX5 417 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 SLC30A10Q6XR72 485 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 SV2AQ7L0J3 742 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 FAM172AQ8WUF8 416 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 CYFIP2Q96F07 1278 aa13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 CHCHD3Q9NX63 227 aaKnown RBP13.96□□□□□ -0.17
CHRNA4-202ENST00000463705 MANSC4A6NHS7 340 aaPredicted RBP13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 KDM1AO60341 852 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 RARGP13631 454 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 ELAVL2Q12926 359 aaKnown RBP13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 KIZQ2M2Z5 673 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 SRLQ86TD4 932 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 AGR3Q8TD06 166 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 SEPT8Q92599 483 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 GPR63Q9BZJ6 419 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 ARHGAP26Q9UNA1 814 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 ATRNO75882 1429 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 ARHGAP10A1A4S6 786 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 NCAM2O15394 837 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 ASMTLO95671 621 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 SYF2O95926 243 aaKnown RBP13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 FAM107AO95990 144 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 MYL6P60660 151 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 TWF1Q12792 350 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 GRIK4Q16099 956 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 FAM83EQ2M2I3 478 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 TRPM8Q7Z2W7 1104 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 CPB2Q96IY4 423 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 DCDC2Q9UHG0 476 aa13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 TSR3Q9UJK0 312 aaKnown RBP13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 PRG3Q9Y2Y8 225 aaPredicted RBP13.96□□□□□ -0.18
CHRNA4-202ENST00000463705 POLE2P56282 527 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 PTGISQ16647 500 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 OR9Q1Q8NGQ5 310 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 SLC20A1Q8WUM9 679 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 ACSF2Q96CM8 615 aaPredicted RBP13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 CCDC126Q96EE4 140 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 FAR2Q96K12 515 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 MTMR9Q96QG7 549 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 MTG1Q9BT17 334 aaPredicted RBP13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 OSGEPQ9NPF4 335 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 GGT7Q9UJ14 662 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 BARX2Q9UMQ3 279 aaPredicted RBP13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 A0A087WZ62 844 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 WTIPA6NIX2 430 aaPredicted RBP13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 H3BRB1 525 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 B3GAT3O94766 335 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 ETFBP38117 255 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 SERPINB8P50452 374 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 OCA2Q04671 838 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 TMEM169Q96HH4 297 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 TBCBQ99426 244 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 FDXACB1Q9BRP7 624 aaPredicted RBP13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 UBE2OQ9C0C9 1292 aaKnown RBP13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 TUT1Q9H6E5 874 aaKnown RBP13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 LATS2Q9NRM7 1088 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 SDR42E2A6NKP2 422 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 DCDC2CA8MYV0 355 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 STK25O00506 426 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 TIMM44O43615 452 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 ACO1P21399 889 aaKnown RBP13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 RRM1P23921 792 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 SLC12A3P55017 1021 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 KDSRQ06136 332 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 KRT72Q14CN4 511 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 C2CD6Q53TS8 623 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 FBXO47Q5MNV8 452 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 MRNIPQ6NTE8 343 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 SOCS4Q8WXH5 440 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 FAM167BQ9BTA0 163 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 KANSL3Q9P2N6 904 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 USP18Q9UMW8 372 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 L1RE1Q9UN81 338 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 PDHXO00330 501 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 RHBDL3P58872 404 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 SLC47A2Q86VL8 602 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 MAP4K3Q8IVH8 894 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 REPS2Q8NFH8 660 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 FBXO32Q969P5 355 aa13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 NAF1Q96HR8 494 aaKnown RBP13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 DRG1Q9Y295 367 aaKnown RBP13.95□□□□□ -0.18
CHRNA4-202ENST00000463705 C2orf81A6NN90 581 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 TRIM49D1C9J1S8 452 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms