RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 TMEM130Q8N3G9 435 aa14.28□□□□□ -0.12
COMMD3-205ENST00000463688 TRIML1Q8N9V2 468 aa14.28□□□□□ -0.12
COMMD3-205ENST00000463688 FBXL13Q8NEE6 735 aa14.28□□□□□ -0.12
COMMD3-205ENST00000463688 CDK5RAP1Q96SZ6 601 aaKnown RBP14.28□□□□□ -0.12
COMMD3-205ENST00000463688 FOXQ1Q9C009 403 aa14.28□□□□□ -0.12
COMMD3-205ENST00000463688 TRPC7Q9HCX4 862 aa14.28□□□□□ -0.12
COMMD3-205ENST00000463688 PNPLA8Q9NP80 782 aa14.28□□□□□ -0.12
COMMD3-205ENST00000463688 CRTAC1Q9NQ79 661 aa14.28□□□□□ -0.12
COMMD3-205ENST00000463688 DLGAP2Q9P1A6 1054 aa14.28□□□□□ -0.12
COMMD3-205ENST00000463688 ARMCX3Q9UH62 379 aaPredicted RBP14.28□□□□□ -0.12
COMMD3-205ENST00000463688 ARHGAP26Q9UNA1 814 aa14.28□□□□□ -0.12
COMMD3-205ENST00000463688 SCN1AP35498 2009 aa14.28□□□□□ -0.12
COMMD3-205ENST00000463688 F8VP50 259 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 NFATC1O95644 943 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 HLA-DRAP01903 254 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 FAM200BP0CF97 657 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 IFNAR2P48551 515 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 CASP4P49662 377 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 UBE2HP62256 183 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 CYP4F8P98187 520 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 INCA1Q0VD86 236 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 PNOCQ13519 176 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 ZCWPW2Q504Y3 356 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 SMYD5Q6GMV2 418 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 FRMD5Q7Z6J6 570 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 CHRDQ9H2X0 955 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 GKN1Q9NS71 199 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 TBC1D14Q9P2M4 693 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 PCDHA5Q9Y5H7 936 aa14.27□□□□□ -0.12
COMMD3-205ENST00000463688 SPECC1L-ADORA2AF8WAN1 911 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 ARNTLO00327 626 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 P4HA2O15460 535 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 GFRA3O60609 400 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 ATP2C2O75185 946 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 LMNAP02545 664 aaKnown RBP14.26□□□□□ -0.13
COMMD3-205ENST00000463688 DRD1P21728 446 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 TBXAS1P24557 533 aaPredicted RBP14.26□□□□□ -0.13
COMMD3-205ENST00000463688 CCNE1P24864 410 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 TARSP26639 723 aaKnown RBP14.26□□□□□ -0.13
COMMD3-205ENST00000463688 PRCPP42785 496 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 GCLMP48507 274 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 PSEN1P49768 467 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 RUNX3Q13761 415 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 TCERG1LQ5VWI1 586 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 TXNDC8Q6A555 127 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 ADSSL1Q8N142 457 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 SPEM1Q8N4L4 309 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 GPR161Q8N6U8 529 aaKnown RBP14.26□□□□□ -0.13
COMMD3-205ENST00000463688 OSCP1Q8WVF1 389 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 USP13Q92995 863 aaPredicted RBP14.26□□□□□ -0.13
COMMD3-205ENST00000463688 OTUB2Q96DC9 234 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 FAM81BQ96LP2 452 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 NACA2Q9H009 215 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 SMYD3Q9H7B4 428 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 LMAN1LQ9HAT1 526 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 RAB20Q9NX57 234 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 ZSCAN32Q9NX65 697 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 KIAA1257Q9ULG3 409 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 F5P12259 2224 aa14.26□□□□□ -0.13
COMMD3-205ENST00000463688 ZNF840PA6NDX5 716 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 PMM2O15305 246 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 AP1G2O75843 785 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 VNN1O95497 513 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 CTHP32929 405 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 CNR2P34972 360 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 CXCL12P48061 93 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 NDST1P52848 882 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 SLC7A9P82251 487 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 MTF1Q14872 753 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 HECTD3Q5T447 861 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 STXBP5Q5T5C0 1151 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 FILIP1Q7Z7B0 1213 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 TMEM150AQ86TG1 271 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 FBXO32Q969P5 355 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 HNRNPABQ99729 332 aaKnown RBP14.25□□□□□ -0.13
COMMD3-205ENST00000463688 FAM83CQ9BQN1 747 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 B3GNT5Q9BYG0 378 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 GZF1Q9H116 711 aaPredicted RBP14.25□□□□□ -0.13
COMMD3-205ENST00000463688 TLR8Q9NR97 1041 aaKnown RBP14.25□□□□□ -0.13
COMMD3-205ENST00000463688 DUS2Q9NX74 493 aaKnown RBP14.25□□□□□ -0.13
COMMD3-205ENST00000463688 RAB23Q9ULC3 237 aa14.25□□□□□ -0.13
COMMD3-205ENST00000463688 NDRG2Q9UN36 371 aaKnown RBP14.25□□□□□ -0.13
COMMD3-205ENST00000463688 PRAMEF12O95522 483 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 ABL1P00519 1130 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 DLG4P78352 724 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 TAF10Q12962 218 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 E2F5Q15329 346 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 SNX30Q5VWJ9 437 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 SCARA5Q6ZMJ2 495 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 ACOT1Q86TX2 421 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 FAM35AQ86V20 835 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 ARHGAP18Q8N392 663 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 ST13P5Q8NFI4 369 aaPredicted RBP14.24□□□□□ -0.13
COMMD3-205ENST00000463688 PLEKHO2Q8TD55 490 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 DUSP9Q99956 384 aaKnown RBP14.24□□□□□ -0.13
COMMD3-205ENST00000463688 UBXN6Q9BZV1 441 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 ANK1P16157 1881 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.24□□□□□ -0.13
COMMD3-205ENST00000463688 PAPSS2O95340 614 aaPredicted RBP14.24□□□□□ -0.13
COMMD3-205ENST00000463688 SP9P0CG40 484 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms