RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SPAG5Q96R06 1193 aa20.95■□□□□ 0.94
COL9A3-204ENST00000463487 STK33Q9BYT3 514 aa20.95■□□□□ 0.94
COL9A3-204ENST00000463487 FBXO44Q9H4M3 255 aa20.95■□□□□ 0.94
COL9A3-204ENST00000463487 COMMD8Q9NX08 183 aa20.95■□□□□ 0.94
COL9A3-204ENST00000463487 GDE1Q9NZC3 331 aa20.95■□□□□ 0.94
COL9A3-204ENST00000463487 TSPAN16Q9UKR8 245 aa20.95■□□□□ 0.94
COL9A3-204ENST00000463487 SIK3Q9Y2K2 1263 aa20.95■□□□□ 0.94
COL9A3-204ENST00000463487 FHOD1Q9Y613 1164 aa20.95■□□□□ 0.94
COL9A3-204ENST00000463487 LOC730098B7Z3J9 87 aa20.94■□□□□ 0.94
COL9A3-204ENST00000463487 SETSIPP0DME0 302 aa20.94■□□□□ 0.94
COL9A3-204ENST00000463487 GNA15P30679 374 aa20.94■□□□□ 0.94
COL9A3-204ENST00000463487 UBASH3AP57075 661 aa20.94■□□□□ 0.94
COL9A3-204ENST00000463487 BST2Q10589 180 aaKnown RBP20.94■□□□□ 0.94
COL9A3-204ENST00000463487 DRAP1Q14919 205 aaPredicted RBP20.94■□□□□ 0.94
COL9A3-204ENST00000463487 CNGA2Q16280 664 aa20.94■□□□□ 0.94
COL9A3-204ENST00000463487 PRSS36Q5K4E3 855 aa20.94■□□□□ 0.94
COL9A3-204ENST00000463487 CLEC20AQ6ZU45 233 aa20.94■□□□□ 0.94
COL9A3-204ENST00000463487 ZDHHC14Q8IZN3 488 aa20.94■□□□□ 0.94
COL9A3-204ENST00000463487 ITFG1Q8TB96 612 aa20.94■□□□□ 0.94
COL9A3-204ENST00000463487 MRPS31Q92665 395 aaKnown RBP20.94■□□□□ 0.94
COL9A3-204ENST00000463487 FGF13Q92913 245 aa20.94■□□□□ 0.94
COL9A3-204ENST00000463487 KCNK16Q96T55 309 aa20.94■□□□□ 0.94
COL9A3-204ENST00000463487 ATXN3LQ9H3M9 355 aa20.94■□□□□ 0.94
COL9A3-204ENST00000463487 SLITRK6Q9H5Y7 841 aa20.94■□□□□ 0.94
COL9A3-204ENST00000463487 MYH10P35580 1976 aa20.94■□□□□ 0.94
COL9A3-204ENST00000463487 A0A1W2PQC6 194 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 A0A1W2PRU2 124 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 C2CD4DB7Z1M9 353 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 O00370 1275 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 THAP12O43422 761 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 CBFA2T2O43439 604 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 HMGA1P17096 107 aaKnown RBP20.93■□□□□ 0.94
COL9A3-204ENST00000463487 DDX6P26196 483 aaKnown RBP eCLIP20.93■□□□□ 0.94
COL9A3-204ENST00000463487 YWHAQP27348 245 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 CACNA2D1P54289 1103 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 POLR2FP61218 127 aaKnown RBP20.93■□□□□ 0.94
COL9A3-204ENST00000463487 SLC5A9Q2M3M2 681 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 LCLAT1Q6UWP7 414 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 CACNA2D4Q7Z3S7 1137 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 GJD3Q8N144 294 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 RNF214Q8ND24 703 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 PDZD8Q8NEN9 1154 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 ING5Q8WYH8 240 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 SMOQ99835 787 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 TTLL2Q9BWV7 592 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 LRRC3Q9BY71 257 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 GANQ9H2C0 597 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 ZNF334Q9HCZ1 680 aaPredicted RBP20.93■□□□□ 0.94
COL9A3-204ENST00000463487 EPS15L1Q9UBC2 864 aa20.93■□□□□ 0.94
COL9A3-204ENST00000463487 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.93■□□□□ 0.94
COL9A3-204ENST00000463487 TCF20Q9UGU0 1960 aaKnown RBP20.93■□□□□ 0.94
COL9A3-204ENST00000463487 C19orf67A6NJJ6 358 aa20.92■□□□□ 0.94
COL9A3-204ENST00000463487 RNF225M0QZC1 329 aaPredicted RBP20.92■□□□□ 0.94
COL9A3-204ENST00000463487 BRD2P25440 801 aaKnown RBP20.92■□□□□ 0.94
COL9A3-204ENST00000463487 PDE6CP51160 858 aa20.92■□□□□ 0.94
COL9A3-204ENST00000463487 SLC5A3P53794 718 aa20.92■□□□□ 0.94
COL9A3-204ENST00000463487 MTMR3Q13615 1198 aa20.92■□□□□ 0.94
COL9A3-204ENST00000463487 MEA1Q16626 185 aa20.92■□□□□ 0.94
COL9A3-204ENST00000463487 MTSS1LQ765P7 747 aa20.92■□□□□ 0.94
COL9A3-204ENST00000463487 NPAS3Q8IXF0 933 aa20.92■□□□□ 0.94
COL9A3-204ENST00000463487 SHKBP1Q8TBC3 707 aa20.92■□□□□ 0.94
COL9A3-204ENST00000463487 OVCA2Q8WZ82 227 aa20.92■□□□□ 0.94
COL9A3-204ENST00000463487 NXPE3Q969Y0 559 aa20.92■□□□□ 0.94
COL9A3-204ENST00000463487 NAA15Q9BXJ9 866 aaKnown RBP20.92■□□□□ 0.94
COL9A3-204ENST00000463487 UBXN6Q9BZV1 441 aa20.92■□□□□ 0.94
COL9A3-204ENST00000463487 TMEM30AQ9NV96 361 aa20.92■□□□□ 0.94
COL9A3-204ENST00000463487 TRPM5Q9NZQ8 1165 aa20.92■□□□□ 0.94
COL9A3-204ENST00000463487 SOBPA7XYQ1 873 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 F8VZ95 297 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 M0QYV0 167 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 FOXN3O00409 490 aaPredicted RBP20.91■□□□□ 0.94
COL9A3-204ENST00000463487 XPO1O14980 1071 aaKnown RBP20.91■□□□□ 0.94
COL9A3-204ENST00000463487 LAMP2P13473 410 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 CEBPBP17676 345 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 CCR2P41597 374 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 KLK7P49862 253 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 IFRD2Q12894 506 aaPredicted RBP20.91■□□□□ 0.94
COL9A3-204ENST00000463487 TEAD2Q15562 447 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 GAREM2Q75VX8 874 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 FAM71AQ8IYT1 594 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 FBXO32Q969P5 355 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 IQCDQ96DY2 449 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 TCEAL4Q96EI5 215 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 MYADMQ96S97 322 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 NLRC4Q9NPP4 1024 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 SPTBN5Q9NRC6 3674 aaKnown RBP20.91■□□□□ 0.94
COL9A3-204ENST00000463487 CEP83Q9Y592 693 aa20.91■□□□□ 0.94
COL9A3-204ENST00000463487 CYP26A1O43174 497 aa20.9■□□□□ 0.94
COL9A3-204ENST00000463487 TEX33O43247 280 aa20.9■□□□□ 0.94
COL9A3-204ENST00000463487 BEST1O76090 585 aa20.9■□□□□ 0.94
COL9A3-204ENST00000463487 CCDC172P0C7W6 258 aa20.9■□□□□ 0.94
COL9A3-204ENST00000463487 STAT1P42224 750 aa20.9■□□□□ 0.94
COL9A3-204ENST00000463487 NR1I3Q14994 352 aa20.9■□□□□ 0.94
COL9A3-204ENST00000463487 DPY19L2P1Q6NXN4 242 aa20.9■□□□□ 0.94
COL9A3-204ENST00000463487 TTC30AQ86WT1 665 aa20.9■□□□□ 0.94
COL9A3-204ENST00000463487 STKLD1Q8NE28 680 aa20.9■□□□□ 0.94
COL9A3-204ENST00000463487 ZMIZ2Q8NF64 920 aa20.9■□□□□ 0.94
COL9A3-204ENST00000463487 TFAP2BQ92481 460 aa20.9■□□□□ 0.94
COL9A3-204ENST00000463487 NAP1L5Q96NT1 182 aaPredicted RBP20.9■□□□□ 0.94
COL9A3-204ENST00000463487 IL21Q9HBE4 155 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms