RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 HIC2Q96JB3 615 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 CDK5RAP3Q96JB5 506 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 CENPKQ9BS16 269 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 TEX13BQ9BXU2 312 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 SYNCQ9H7C4 482 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 AAASQ9NRG9 546 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 KRT82Q9NSB4 513 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 BTBD7Q9P203 1132 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 LGALS13Q9UHV8 139 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 RIPK3Q9Y572 518 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 ACTL7BQ9Y614 415 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 TTC4O95801 387 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 ZCCHC18P0CG32 403 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 TYRP1P17643 537 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 TXKP42681 527 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 BPIFB4P59827 614 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 DNAJC3Q13217 504 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 PDE1CQ14123 709 aaPredicted RBP9.11□□□□□ -0.95
SHQ1-203ENST00000463369 NONOQ15233 471 aaKnown RBP eCLIP9.11□□□□□ -0.95
SHQ1-203ENST00000463369 UBE2SQ16763 222 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 EXOC3L4Q17RC7 722 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 SLC45A4Q5BKX6 768 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 FAM26FQ5R3K3 315 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 SH2D4BQ5SQS7 431 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 SNRNP48Q6IEG0 339 aaKnown RBP9.11□□□□□ -0.95
SHQ1-203ENST00000463369 AADACL2Q6P093 401 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 USP17L6PQ6QN14 398 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 RGS9BPQ6ZS82 235 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 CEP128Q6ZU80 1094 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 EPM2AIP1Q7L775 607 aaPredicted RBP9.11□□□□□ -0.95
SHQ1-203ENST00000463369 ZDHHC14Q8IZN3 488 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 ANKRD35Q8N283 1001 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 C10orf82Q8WW14 230 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 MFSD3Q96ES6 412 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 RHOBTB2Q9BYZ6 727 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 SAP130Q9H0E3 1048 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 TMEM165Q9HC07 324 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 IL1RAPL1Q9NZN1 696 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 RBPJLQ9UBG7 517 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 PFDN2Q9UHV9 154 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 SYNGAP1Q96PV0 1343 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 FAM47DPA6NHR8 397 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 TP73O15350 636 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 GSC2O15499 205 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 CCDC22O60826 627 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 PFDN1O60925 122 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 CNMDO75829 334 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 TMCC1O94876 653 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 GGPS1O95749 300 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 CFBP00751 764 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 ASLP04424 464 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 SPATA31D3P0C874 917 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 COILP38432 576 aaPredicted RBP9.11□□□□□ -0.95
SHQ1-203ENST00000463369 MAGEA10P43363 369 aaPredicted RBP9.11□□□□□ -0.95
SHQ1-203ENST00000463369 DGKGP49619 791 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 CDK7P50613 346 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 HSD17B4P51659 736 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 CALCOCO2Q13137 446 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 AP3B2Q13367 1082 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 CYP1B1Q16678 543 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 CTC1Q2NKJ3 1217 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 DAB2IPQ5VWQ8 1189 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 XRRA1Q6P2D8 792 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 SEPT14Q6ZU15 432 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 SPATA31D4Q6ZUB0 917 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 NEK8Q86SG6 692 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 RIOX2Q8IUF8 465 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 KBTBD2Q8IY47 623 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 SRRM1Q8IYB3 904 aaKnown RBP9.11□□□□□ -0.95
SHQ1-203ENST00000463369 LNX1Q8TBB1 728 aaPredicted RBP9.11□□□□□ -0.95
SHQ1-203ENST00000463369 IPCEF1Q8WWN9 437 aaPredicted RBP9.11□□□□□ -0.95
SHQ1-203ENST00000463369 CTNNBL1Q8WYA6 563 aaPredicted RBP9.11□□□□□ -0.95
SHQ1-203ENST00000463369 OLFM3Q96PB7 478 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 MTMR9Q96QG7 549 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 TUBGCP5Q96RT8 1024 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 BTBD10Q9BSF8 475 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 KCTD10Q9H3F6 313 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 SMYD2Q9NRG4 433 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 HSFX1Q9UBD0 423 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 ZFP69BQ9UJL9 534 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 NAALADL1Q9UQQ1 740 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 PCDHGA10Q9Y5H3 936 aa9.11□□□□□ -0.95
SHQ1-203ENST00000463369 DOCK5Q9H7D0 1870 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 NFIBO00712 420 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 SMAD7O15105 426 aaKnown RBP9.1□□□□□ -0.95
SHQ1-203ENST00000463369 EDF1O60869 148 aaKnown RBP9.1□□□□□ -0.95
SHQ1-203ENST00000463369 TNFRSF21O75509 655 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 POLR2MP0CAP2 368 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 CYP2C8P10632 490 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 MUTP22033 750 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 EIF4BP23588 611 aaKnown RBP9.1□□□□□ -0.95
SHQ1-203ENST00000463369 CCNFP41002 786 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 ORC2Q13416 577 aaPredicted RBP9.1□□□□□ -0.95
SHQ1-203ENST00000463369 CTTNQ14247 550 aaKnown RBP9.1□□□□□ -0.95
SHQ1-203ENST00000463369 LHFPL2Q6ZUX7 228 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 KCNK18Q7Z418 384 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 FRMD5Q7Z6J6 570 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 STRA8Q7Z7C7 330 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 CCDC105Q8IYK2 499 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 AFAP1L2Q8N4X5 818 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms