RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 KCNH2Q12809 1159 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 CUL2Q13617 745 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 MLF2Q15773 248 aaPredicted RBP19.99■□□□□ 0.79
COL9A3-203ENST00000462700 SLC44A4Q53GD3 710 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 ZNF394Q53GI3 561 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 NUP93Q8N1F7 819 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 TMEM105Q8N8V8 129 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 LRRC3BQ96PB8 259 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 HNRNPABQ99729 332 aaKnown RBP19.99■□□□□ 0.79
COL9A3-203ENST00000462700 DNAI2Q9GZS0 605 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 SMG9Q9H0W8 520 aaKnown RBP19.99■□□□□ 0.79
COL9A3-203ENST00000462700 TBC1D17Q9HA65 648 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 CSNK1G1Q9HCP0 422 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.99■□□□□ 0.79
COL9A3-203ENST00000462700 ZNF263O14978 683 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 AFPP02771 609 aaKnown RBP19.98■□□□□ 0.79
COL9A3-203ENST00000462700 AOC1P19801 751 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 ADORA2BP29275 332 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 STARD6P59095 220 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 PRKCQQ04759 706 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 CETN1Q12798 172 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 LRMPQ12912 555 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 PHLDB3Q6NSJ2 640 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 YAF2Q8IY57 180 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 CELF5Q8N6W0 485 aaKnown RBP19.98■□□□□ 0.79
COL9A3-203ENST00000462700 ZMIZ2Q8NF64 920 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 IRF7Q92985 503 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 CYFIP2Q96F07 1278 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 SHDQ96IW2 340 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 CNOT6LQ96LI5 555 aaKnown RBP19.98■□□□□ 0.79
COL9A3-203ENST00000462700 SMOQ99835 787 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 TRPC7Q9HCX4 862 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 DACH1Q9UI36 760 aa19.98■□□□□ 0.79
COL9A3-203ENST00000462700 NUP210Q8TEM1 1887 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-203ENST00000462700 STK25O00506 426 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 TNFRSF10BO14763 440 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 BEST1O76090 585 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 RTN3O95197 1032 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-203ENST00000462700 FAM200BP0CF97 657 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 RFX1P22670 979 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 SLC5A3P53794 718 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 IFRD2Q12894 506 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-203ENST00000462700 SLC4A11Q8NBS3 891 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 LMO3Q8TAP4 145 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 BPIFB1Q8TDL5 484 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 USP13Q92995 863 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-203ENST00000462700 TMEM176AQ96HP8 235 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 KCNH6Q9H252 994 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 KIF9Q9HAQ2 790 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 TRPV5Q9NQA5 729 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 HEBP1Q9NRV9 189 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 TDP1Q9NUW8 608 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 TRPM5Q9NZQ8 1165 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 CCL26Q9Y258 94 aa19.97■□□□□ 0.79
COL9A3-203ENST00000462700 ARIH1Q9Y4X5 557 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-203ENST00000462700 KMT2EQ8IZD2 1858 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 TRAV19A0A0A6YYK7 116 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 C2orf78A6NCI8 922 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 ARNTLO00327 626 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 CHADO15335 359 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 PI15O43692 258 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 TBXAS1P24557 533 aaPredicted RBP19.96■□□□□ 0.79
COL9A3-203ENST00000462700 YWHAQP27348 245 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 ERCC5P28715 1186 aaPredicted RBP19.96■□□□□ 0.79
COL9A3-203ENST00000462700 PPP3CCP48454 512 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 RAD23BP54727 409 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 MAP3K7CLP57077 242 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 YWHAEP62258 255 aaKnown RBP19.96■□□□□ 0.79
COL9A3-203ENST00000462700 TAF10Q12962 218 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 ZNF268Q14587 947 aaPredicted RBP19.96■□□□□ 0.79
COL9A3-203ENST00000462700 RBM43Q6ZSC3 357 aaKnown RBP19.96■□□□□ 0.79
COL9A3-203ENST00000462700 CLEC20AQ6ZU45 233 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 IRF2BP1Q8IU81 584 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 HEXIM2Q96MH2 286 aaKnown RBP19.96■□□□□ 0.79
COL9A3-203ENST00000462700 NT5C1BQ96P26 610 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 SLITRK1Q96PX8 696 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 SLC22A12Q96S37 553 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 DDX23Q9BUQ8 820 aaKnown RBP19.96■□□□□ 0.79
COL9A3-203ENST00000462700 IL37Q9NZH6 218 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 GCNT4Q9P109 453 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 OBSL1O75147 1896 aa19.96■□□□□ 0.79
COL9A3-203ENST00000462700 COL4A3Q01955 1670 aa19.95■□□□□ 0.78
COL9A3-203ENST00000462700 ZNF840PA6NDX5 716 aa19.95■□□□□ 0.78
COL9A3-203ENST00000462700 CKMP06732 381 aa19.95■□□□□ 0.78
COL9A3-203ENST00000462700 USP17L7P0C7H9 530 aa19.95■□□□□ 0.78
COL9A3-203ENST00000462700 TPD52L1Q16890 204 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-203ENST00000462700 ARHGAP29Q52LW3 1261 aa19.95■□□□□ 0.78
COL9A3-203ENST00000462700 PPP1R26Q5T8A7 1209 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-203ENST00000462700 TPRG1Q6ZUI0 275 aa19.95■□□□□ 0.78
COL9A3-203ENST00000462700 UBR7Q8N806 425 aa19.95■□□□□ 0.78
COL9A3-203ENST00000462700 ARL14EPQ8N8R7 260 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-203ENST00000462700 EHBP1Q8NDI1 1231 aa19.95■□□□□ 0.78
COL9A3-203ENST00000462700 SCAMP5Q8TAC9 235 aa19.95■□□□□ 0.78
COL9A3-203ENST00000462700 OVCA2Q8WZ82 227 aa19.95■□□□□ 0.78
COL9A3-203ENST00000462700 FBXO32Q969P5 355 aa19.95■□□□□ 0.78
COL9A3-203ENST00000462700 CYP2S1Q96SQ9 504 aa19.95■□□□□ 0.78
COL9A3-203ENST00000462700 FOXQ1Q9C009 403 aa19.95■□□□□ 0.78
COL9A3-203ENST00000462700 COMMD8Q9NX08 183 aa19.95■□□□□ 0.78
COL9A3-203ENST00000462700 GREB1Q4ZG55 1949 aa19.94■□□□□ 0.78
COL9A3-203ENST00000462700 COL4A2P08572 1712 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms