RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 DENND4CQ5VZ89 1909 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 OBSL1O75147 1896 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 PRAMEF12O95522 483 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 PDGFBP01127 241 aaPredicted RBP16.8■□□□□ 0.28
ERCC3-206ENST00000462306 CFHP08603 1231 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 ACO1P21399 889 aaKnown RBP16.8■□□□□ 0.28
ERCC3-206ENST00000462306 DDX6P26196 483 aaKnown RBP eCLIP16.8■□□□□ 0.28
ERCC3-206ENST00000462306 YWHAEP62258 255 aaKnown RBP16.8■□□□□ 0.28
ERCC3-206ENST00000462306 STX1AQ16623 288 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 MAN2A1Q16706 1144 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 HSP90AA4PQ58FG1 418 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 PPP1R26Q5T8A7 1209 aaPredicted RBP16.8■□□□□ 0.28
ERCC3-206ENST00000462306 PHLDB3Q6NSJ2 640 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 CLEC20AQ6ZU45 233 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 MON1AQ86VX9 555 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 GPIHBP1Q8IV16 184 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 CMTM8Q8IZV2 173 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 NUP93Q8N1F7 819 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 PPM1KQ8N3J5 372 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 MAB21L3Q8N8X9 362 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 MRPS31Q92665 395 aaKnown RBP16.8■□□□□ 0.28
ERCC3-206ENST00000462306 HEXIM2Q96MH2 286 aaKnown RBP16.8■□□□□ 0.28
ERCC3-206ENST00000462306 LRRC3BQ96PB8 259 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 DNAI2Q9GZS0 605 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 EHD2Q9NZN4 543 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 WNT16Q9UBV4 365 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 NFE2L3Q9Y4A8 694 aa16.8■□□□□ 0.28
ERCC3-206ENST00000462306 HEPACAM2A8MVW5 462 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 FAM200BP0CF97 657 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 PSMC3P17980 439 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 MAP3K7CLP57077 242 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 GCNT1Q02742 428 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 MIIPQ5JXC2 388 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 ARHGAP17Q68EM7 881 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 CAVIN1Q6NZI2 390 aaKnown RBP16.79■□□□□ 0.28
ERCC3-206ENST00000462306 RRAGAQ7L523 313 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 MFSD6LQ8IWD5 586 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 SCAMP5Q8TAC9 235 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 PBXIP1Q96AQ6 731 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 E2F7Q96AV8 911 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 KREMEN1Q96MU8 473 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 CRACR2AQ9BSW2 395 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 GCNT4Q9P109 453 aa16.79■□□□□ 0.28
ERCC3-206ENST00000462306 NUP210Q8TEM1 1887 aaPredicted RBP16.78■□□□□ 0.28
ERCC3-206ENST00000462306 FAM92AA1XBS5 289 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 GTPBP10A4D1E9 387 aaKnown RBP16.78■□□□□ 0.28
ERCC3-206ENST00000462306 KRBA1A5PL33 1030 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 ZNF840PA6NDX5 716 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 KCNJ18B7U540 433 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 HHLA1C9JL84 531 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 RTN3O95197 1032 aaPredicted RBP16.78■□□□□ 0.28
ERCC3-206ENST00000462306 SLC9A1P19634 815 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 YWHAQP27348 245 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 SLC5A3P53794 718 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 TAF10Q12962 218 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 GRM2Q14416 872 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 KCNJ12Q14500 433 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 IER5LQ5T953 404 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 CDKAL1Q5VV42 579 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 TRIM65Q6PJ69 517 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 GBP6Q6ZN66 633 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 DEPDC1BQ8WUY9 529 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 SLC22A12Q96S37 553 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 CYP2S1Q96SQ9 504 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 TUBGCP2Q9BSJ2 902 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 TRMT61BQ9BVS5 477 aaKnown RBP16.78■□□□□ 0.28
ERCC3-206ENST00000462306 DUSP16Q9BY84 665 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 SMG9Q9H0W8 520 aaKnown RBP16.78■□□□□ 0.28
ERCC3-206ENST00000462306 NDST4Q9H3R1 872 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 COMMD8Q9NX08 183 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 OBP2AQ9NY56 170 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 TRPM5Q9NZQ8 1165 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 FBXL21Q9UKT6 434 aa16.78■□□□□ 0.28
ERCC3-206ENST00000462306 C2orf78A6NCI8 922 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 RNF225M0QZC1 329 aaPredicted RBP16.77■□□□□ 0.28
ERCC3-206ENST00000462306 NPR3P17342 541 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 EEF1GP26641 437 aaKnown RBP16.77■□□□□ 0.28
ERCC3-206ENST00000462306 AVPR1AP37288 418 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 PPP3CCP48454 512 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 TYRO3Q06418 890 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 FCHO2Q0JRZ9 810 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 IFRD2Q12894 506 aaPredicted RBP16.77■□□□□ 0.28
ERCC3-206ENST00000462306 KLHL40Q2TBA0 621 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 VWA3BQ502W6 1294 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 TCP11X2Q5H9J9 407 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 TMEM270Q6UE05 265 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 GPRIN1Q7Z2K8 1008 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 SIX5Q8N196 739 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 FBXL6Q8N531 539 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 USP13Q92995 863 aaPredicted RBP16.77■□□□□ 0.28
ERCC3-206ENST00000462306 PNPLA8Q9NP80 782 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 CA14Q9ULX7 337 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 CCL26Q9Y258 94 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 PCDHB4Q9Y5E5 795 aa16.77■□□□□ 0.28
ERCC3-206ENST00000462306 ZNF638Q14966 1978 aaKnown RBP16.77■□□□□ 0.27
ERCC3-206ENST00000462306 ANAPC1Q9H1A4 1944 aa16.76■□□□□ 0.27
ERCC3-206ENST00000462306 DPYSL4O14531 572 aa16.76■□□□□ 0.27
ERCC3-206ENST00000462306 PAEPP09466 180 aa16.76■□□□□ 0.27
ERCC3-206ENST00000462306 VDRP11473 427 aa16.76■□□□□ 0.27
ERCC3-206ENST00000462306 PRKCSHP14314 528 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms