RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 MAP4K4O95819 1239 aaPredicted RBP5.77□□□□□ -1.49
COPS3-204ENST00000462236 SLC5A1P13866 664 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 PHKA1P46020 1223 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 ADAM8P78325 824 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 CCT2P78371 535 aaKnown RBP5.77□□□□□ -1.49
COPS3-204ENST00000462236 IRX3P78415 501 aaPredicted RBP5.77□□□□□ -1.49
COPS3-204ENST00000462236 ATP2C1P98194 919 aaPredicted RBP5.77□□□□□ -1.49
COPS3-204ENST00000462236 UAP1L1Q3KQV9 507 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 TRIM60Q495X7 471 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 MINDY4Q4G0A6 757 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 MFSD14CQ5VZR4 134 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 ABHD15Q6UXT9 468 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 PDZD4Q76G19 769 aaPredicted RBP5.77□□□□□ -1.49
COPS3-204ENST00000462236 CMTM4Q8IZR5 234 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 PPM1NQ8N819 430 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 OR7D4Q8NG98 312 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 NRG4Q8WWG1 115 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 CFHR4Q92496 578 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 EDC3Q96F86 508 aaKnown RBP5.77□□□□□ -1.49
COPS3-204ENST00000462236 C12orf42Q96LP6 360 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 C7orf25Q9BPX7 421 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 LRFN3Q9BTN0 628 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 DNM3Q9UQ16 869 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 ATP11BQ9Y2G3 1177 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 RABGAP1Q9Y3P9 1069 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 COL4A4P53420 1690 aaPredicted RBP5.77□□□□□ -1.49
COPS3-204ENST00000462236 MYO10Q9HD67 2058 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 DMDP11532 3685 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 LCTP09848 1927 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 MYH7P12883 1935 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 MYH4Q9Y623 1939 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 ROBO3Q96MS0 1386 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 SCN10AQ9Y5Y9 1956 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 DCHS1Q96JQ0 3298 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 LAMTOR5O43504 91 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 OFD1O75665 1012 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 PDCP20941 246 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 LPOP22079 712 aaPredicted RBP5.76□□□□□ -1.49
COPS3-204ENST00000462236 RPS19P39019 145 aaKnown RBP5.76□□□□□ -1.49
COPS3-204ENST00000462236 BTDP43251 543 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 TLE2Q04725 743 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 DUSP2Q05923 314 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 MLC1Q15049 377 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 LRRC41Q15345 812 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 SHROOM1Q2M3G4 852 aaPredicted RBP5.76□□□□□ -1.49
COPS3-204ENST00000462236 GFOD2Q3B7J2 385 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 ATAT1Q5SQI0 421 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 THEMIS2Q5TEJ8 643 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 KRT40Q6A162 431 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 USP45Q70EL2 814 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 ZGPATQ8N5A5 531 aaKnown RBP5.76□□□□□ -1.49
COPS3-204ENST00000462236 MSL3Q8N5Y2 521 aaKnown RBP5.76□□□□□ -1.49
COPS3-204ENST00000462236 ANKRD53Q8N9V6 530 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 OR14K1Q8NGZ2 314 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 TIFAQ96CG3 184 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 BORCS6Q96GS4 357 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 USP44Q9H0E7 712 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 ENKD1Q9H0I2 346 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 PRKRIP1Q9H875 184 aaPredicted RBP5.76□□□□□ -1.49
COPS3-204ENST00000462236 AS3MTQ9HBK9 375 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 HERC5Q9UII4 1024 aaKnown RBP5.76□□□□□ -1.49
COPS3-204ENST00000462236 INTUQ9ULD6 942 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 OAZ3Q9UMX2 235 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 TANC1Q9C0D5 1861 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 MYO15AQ9UKN7 3530 aa5.76□□□□□ -1.49
COPS3-204ENST00000462236 GREB1LQ9C091 1923 aaPredicted RBP5.76□□□□□ -1.49
COPS3-204ENST00000462236 MICAL3Q7RTP6 2002 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 NLRC5Q86WI3 1866 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 MATN2O00339 956 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 SLC16A6O15403 523 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 SEPT4O43236 478 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 CIAO1O76071 339 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 ASNSP08243 561 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 CLTBP09497 229 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 BMP7P18075 431 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 CR2P20023 1033 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 EDNRBP24530 442 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 IL12RB1P42701 662 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 EXOSC9Q06265 439 aaKnown RBP5.75□□□□□ -1.49
COPS3-204ENST00000462236 PICALMQ13492 652 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 NOMO1Q15155 1222 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 ATP2B3Q16720 1220 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 CATSPERGQ6ZRH7 1159 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 LCNL1Q6ZST4 164 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 Q6ZVL8 140 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 ANKRD33Q7Z3H0 272 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 TTC7BQ86TV6 843 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 TPH2Q8IWU9 490 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 CASKIN2Q8WXE0 1202 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 HPS3Q969F9 1004 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 NSUN4Q96CB9 384 aaKnown RBP5.75□□□□□ -1.49
COPS3-204ENST00000462236 CLIP3Q96DZ5 547 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 C1GALT1C1Q96EU7 318 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 LMF1Q96S06 567 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 GPHA2Q96T91 129 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 MAP3K14Q99558 947 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 XYLT2Q9H1B5 865 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 EPHX3Q9H6B9 360 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 GOLGA2P5Q9HBQ8 144 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 PARD6AQ9NPB6 346 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms