RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SYKP43405 635 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 PPP3CCP48454 512 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 NDUFA8P51970 172 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 PSMC1P62191 440 aaKnown RBP9.77□□□□□ -0.85
BRCA1-207ENST00000461798 TNNC1P63316 161 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 NOP14P78316 857 aaKnown RBP9.77□□□□□ -0.85
BRCA1-207ENST00000461798 AMPD2Q01433 879 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 ENPEPQ07075 957 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 TNK2Q07912 1038 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 RUNX3Q13761 415 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 PDGFRLQ15198 375 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 NFIL3Q16649 462 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 TMEM196Q5HYL7 178 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 TDRD10Q5VZ19 366 aaKnown RBP9.77□□□□□ -0.85
BRCA1-207ENST00000461798 TSSK4Q6SA08 328 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 DENND5BQ6ZUT9 1274 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 FSIP1Q8NA03 581 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 STKLD1Q8NE28 680 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 OR6B3Q8NGW1 331 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 RIN3Q8TB24 985 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 CYP2S1Q96SQ9 504 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 GTF3C3Q9Y5Q9 886 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 MYO15AQ9UKN7 3530 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 FANCMQ8IYD8 2048 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 ZNF292O60281 2723 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 MIA3Q5JRA6 1907 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-207ENST00000461798 TRAV19A0A0A6YYK7 116 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 ZNF840PA6NDX5 716 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 OTOL1A6NHN0 477 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-207ENST00000461798 A8MXQ7 604 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 TRIM66O15016 1216 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 PHACTR2O75167 634 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 KIF20AO95235 890 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 VNN1O95497 513 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 NR3C1P04150 777 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 HDCP19113 662 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 CASP4P49662 377 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 PDE6CP51160 858 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 USP46P62068 366 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 SATB1Q01826 763 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 CYP27A1Q02318 531 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 DPYDQ12882 1025 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 NCOA4Q13772 614 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 ZNF77Q15935 545 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 SGSM1Q2NKQ1 1148 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 ZACNQ401N2 412 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 MDH1BQ5I0G3 518 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 CC2D1AQ6P1N0 951 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-207ENST00000461798 KRBA2Q6ZNG9 492 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 TTC8Q8TAM2 541 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 OSCP1Q8WVF1 389 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 TAF4BQ92750 862 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 CHFRQ96EP1 664 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 CHAMP1Q96JM3 812 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 SLC22A12Q96S37 553 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 B3GNT5Q9BYG0 378 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 ELOVL4Q9GZR5 314 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 RBM12Q9NTZ6 932 aaKnown RBP9.76□□□□□ -0.85
BRCA1-207ENST00000461798 IL37Q9NZH6 218 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 TRPM5Q9NZQ8 1165 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 NXF1Q9UBU9 619 aaKnown RBP9.76□□□□□ -0.85
BRCA1-207ENST00000461798 ARHGAP26Q9UNA1 814 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 DMDP11532 3685 aa9.76□□□□□ -0.85
BRCA1-207ENST00000461798 SPTBN4Q9H254 2564 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 CHURC1-FNTBB4DL54 471 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 F8VP50 259 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 K7ESF4 209 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 CALUO43852 315 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-207ENST00000461798 OLFM2O95897 454 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 CKMP06732 381 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 ANXA13P27216 316 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 CNR2P34972 360 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 DLG4P78352 724 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 SLC7A9P82251 487 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 FOXK2Q01167 660 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 USP4Q13107 963 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 BIRC3Q13489 604 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 KCNB1Q14721 858 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 MTF1Q14872 753 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 PON2Q15165 354 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 ZNF699Q32M78 642 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 ZNF667Q5HYK9 610 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 C1orf220Q5T0J3 134 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 TRIM68Q6AZZ1 485 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 FSTL4Q6MZW2 842 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 PAQR9Q6ZVX9 377 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 SV2AQ7L0J3 742 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 CRYBG2Q8N1P7 616 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 GUF1Q8N442 669 aaKnown RBP9.75□□□□□ -0.85
BRCA1-207ENST00000461798 GPR161Q8N6U8 529 aaKnown RBP9.75□□□□□ -0.85
BRCA1-207ENST00000461798 ARL14EPQ8N8R7 260 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-207ENST00000461798 B3GALNT2Q8NCR0 500 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 CCDC47Q96A33 483 aaKnown RBP9.75□□□□□ -0.85
BRCA1-207ENST00000461798 ZNF518BQ9C0D4 1074 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 DPEP3Q9H4B8 488 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 EBF3Q9H4W6 596 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 ECT2Q9H8V3 914 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 TMEM30AQ9NV96 361 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 COMMD8Q9NX08 183 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms