RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 PAQR9Q6ZVX9 377 aa23.9■■□□□ 1.42
TRAF4-207ENST00000461195 CELF5Q8N6W0 485 aaKnown RBP23.9■■□□□ 1.42
TRAF4-207ENST00000461195 SMARCD1Q96GM5 515 aa23.9■■□□□ 1.42
TRAF4-207ENST00000461195 DDX23Q9BUQ8 820 aaKnown RBP23.9■■□□□ 1.42
TRAF4-207ENST00000461195 TTLL2Q9BWV7 592 aa23.9■■□□□ 1.42
TRAF4-207ENST00000461195 HEBP1Q9NRV9 189 aa23.9■■□□□ 1.42
TRAF4-207ENST00000461195 TMEM30AQ9NV96 361 aa23.9■■□□□ 1.42
TRAF4-207ENST00000461195 COQ4Q9Y3A0 265 aa23.9■■□□□ 1.42
TRAF4-207ENST00000461195 SIT1Q9Y3P8 196 aa23.9■■□□□ 1.42
TRAF4-207ENST00000461195 KANSL1LA0AUZ9 987 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 GALR2O43603 387 aaPredicted RBP23.89■■□□□ 1.41
TRAF4-207ENST00000461195 CD58P19256 250 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 STX17P56962 302 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 USP46P62068 366 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 TPRG1Q6ZUI0 275 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 FUKQ8N0W3 1084 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 BPIFB1Q8TDL5 484 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 LRRC3BQ96PB8 259 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 NT5C1AQ9BXI3 368 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 FOXQ1Q9C009 403 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 DNAI2Q9GZS0 605 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 SMG9Q9H0W8 520 aaKnown RBP23.89■■□□□ 1.41
TRAF4-207ENST00000461195 CLSTN2Q9H4D0 955 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 FAM86C1Q9NVL1 165 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 COL4A2P08572 1712 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 COL4A3Q01955 1670 aa23.89■■□□□ 1.41
TRAF4-207ENST00000461195 ARHGAP29Q52LW3 1261 aa23.88■■□□□ 1.41
TRAF4-207ENST00000461195 PJA1Q8NG27 643 aa23.88■■□□□ 1.41
TRAF4-207ENST00000461195 TWNKQ96RR1 684 aa23.88■■□□□ 1.41
TRAF4-207ENST00000461195 KIF9Q9HAQ2 790 aa23.88■■□□□ 1.41
TRAF4-207ENST00000461195 TRPC7Q9HCX4 862 aa23.88■■□□□ 1.41
TRAF4-207ENST00000461195 DMAP1Q9NPF5 467 aaPredicted RBP23.88■■□□□ 1.41
TRAF4-207ENST00000461195 TDP1Q9NUW8 608 aa23.88■■□□□ 1.41
TRAF4-207ENST00000461195 TRPM5Q9NZQ8 1165 aa23.88■■□□□ 1.41
TRAF4-207ENST00000461195 MYH10P35580 1976 aa23.88■■□□□ 1.41
TRAF4-207ENST00000461195 MIA3Q5JRA6 1907 aa23.88■■□□□ 1.41
TRAF4-207ENST00000461195 TRAV19A0A0A6YYK7 116 aa23.87■■□□□ 1.41
TRAF4-207ENST00000461195 ARNTLO00327 626 aa23.87■■□□□ 1.41
TRAF4-207ENST00000461195 CILPO75339 1184 aa23.87■■□□□ 1.41
TRAF4-207ENST00000461195 AP1G2O75843 785 aa23.87■■□□□ 1.41
TRAF4-207ENST00000461195 CCDC130P13994 396 aa23.87■■□□□ 1.41
TRAF4-207ENST00000461195 PPP3CCP48454 512 aa23.87■■□□□ 1.41
TRAF4-207ENST00000461195 NUP93Q8N1F7 819 aa23.87■■□□□ 1.41
TRAF4-207ENST00000461195 TTC39CQ8N584 583 aa23.87■■□□□ 1.41
TRAF4-207ENST00000461195 C12orf29Q8N999 325 aa23.87■■□□□ 1.41
TRAF4-207ENST00000461195 SLC2A14Q8TDB8 520 aa23.87■■□□□ 1.41
TRAF4-207ENST00000461195 CSGALNACT1Q8TDX6 532 aa23.87■■□□□ 1.41
TRAF4-207ENST00000461195 USP13Q92995 863 aaPredicted RBP23.87■■□□□ 1.41
TRAF4-207ENST00000461195 KCNK16Q96T55 309 aa23.87■■□□□ 1.41
TRAF4-207ENST00000461195 KRT82Q9NSB4 513 aa23.87■■□□□ 1.41
TRAF4-207ENST00000461195 FAM49BQ9NUQ9 324 aa23.87■■□□□ 1.41
TRAF4-207ENST00000461195 THG1LQ9NWX6 298 aaKnown RBP23.87■■□□□ 1.41
TRAF4-207ENST00000461195 RTN3O95197 1032 aaPredicted RBP23.86■■□□□ 1.41
TRAF4-207ENST00000461195 GNA14O95837 355 aa23.86■■□□□ 1.41
TRAF4-207ENST00000461195 USP17L7P0C7H9 530 aa23.86■■□□□ 1.41
TRAF4-207ENST00000461195 FMO5P49326 533 aa23.86■■□□□ 1.41
TRAF4-207ENST00000461195 PLCB2Q00722 1185 aa23.86■■□□□ 1.41
TRAF4-207ENST00000461195 ZNF268Q14587 947 aaPredicted RBP23.86■■□□□ 1.41
TRAF4-207ENST00000461195 UBXN2BQ14CS0 331 aa23.86■■□□□ 1.41
TRAF4-207ENST00000461195 ZNF852Q6ZMS4 543 aa23.86■■□□□ 1.41
TRAF4-207ENST00000461195 CCDC105Q8IYK2 499 aa23.86■■□□□ 1.41
TRAF4-207ENST00000461195 DTWD2Q8NBA8 298 aa23.86■■□□□ 1.41
TRAF4-207ENST00000461195 WHAMMQ8TF30 809 aa23.86■■□□□ 1.41
TRAF4-207ENST00000461195 TATDN2Q93075 761 aa23.86■■□□□ 1.41
TRAF4-207ENST00000461195 OSBPL6Q9BZF3 934 aa23.86■■□□□ 1.41
TRAF4-207ENST00000461195 FAM124BQ9H5Z6 455 aaPredicted RBP23.86■■□□□ 1.41
TRAF4-207ENST00000461195 LTB4R2Q9NPC1 389 aa23.86■■□□□ 1.41
TRAF4-207ENST00000461195 CCL26Q9Y258 94 aa23.86■■□□□ 1.41
TRAF4-207ENST00000461195 KIF26AQ9ULI4 1882 aaPredicted RBP23.85■■□□□ 1.41
TRAF4-207ENST00000461195 MAN2B1O00754 1011 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 FGFR1OPO95684 399 aaKnown RBP23.85■■□□□ 1.41
TRAF4-207ENST00000461195 CKMP06732 381 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 DCNP07585 359 aaKnown RBP23.85■■□□□ 1.41
TRAF4-207ENST00000461195 GLULP15104 373 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 CD72P21854 359 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 YWHAQP27348 245 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 PDE6CP51160 858 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 IFRD2Q12894 506 aaPredicted RBP23.85■■□□□ 1.41
TRAF4-207ENST00000461195 TAF10Q12962 218 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 CYFIP2Q96F07 1278 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 ZFYVE19Q96K21 471 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 IPO9Q96P70 1041 aaKnown RBP23.85■■□□□ 1.41
TRAF4-207ENST00000461195 GBP4Q96PP9 640 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 SLITRK1Q96PX8 696 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 NELL2Q99435 816 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 HNRNPABQ99729 332 aaKnown RBP23.85■■□□□ 1.41
TRAF4-207ENST00000461195 SRRTQ9BXP5 876 aaKnown RBP23.85■■□□□ 1.41
TRAF4-207ENST00000461195 IRF2BPLQ9H1B7 796 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 CISHQ9NSE2 258 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 LMBRD1Q9NUN5 540 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 GCNT4Q9P109 453 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 RWDD2AQ9UIY3 292 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 MRPS17Q9Y2R5 130 aaKnown RBP23.85■■□□□ 1.41
TRAF4-207ENST00000461195 PIAS3Q9Y6X2 628 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 CFAP54Q96N23 3096 aa23.85■■□□□ 1.41
TRAF4-207ENST00000461195 C2orf78A6NCI8 922 aa23.84■■□□□ 1.41
TRAF4-207ENST00000461195 FAM170BA6NMN3 283 aa23.84■■□□□ 1.41
TRAF4-207ENST00000461195 PMM2O15305 246 aa23.84■■□□□ 1.41
TRAF4-207ENST00000461195 FAM200BP0CF97 657 aa23.84■■□□□ 1.41
TRAF4-207ENST00000461195 PFKLP17858 780 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms