RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 ARHGAP26Q9UNA1 814 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 ASCC3Q8N3C0 2202 aaKnown RBP15.7■□□□□ 0.1
SMPD4-216ENST00000461187 CLIC2O15247 247 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 FOXD2O60548 495 aaPredicted RBP15.7■□□□□ 0.1
SMPD4-216ENST00000461187 CUTAO60888 179 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 YEATS4O95619 227 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 DLATP10515 647 aaKnown RBP15.7■□□□□ 0.1
SMPD4-216ENST00000461187 GRIK1P39086 918 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 ZXDBP98169 803 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 CYP27A1Q02318 531 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 EHHADHQ08426 723 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 KCNB1Q14721 858 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 PSMD6Q15008 389 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 DENND5BQ6ZUT9 1274 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 IQUBQ8NA54 791 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 RPLP0P6Q8NHW5 317 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 MYCBPAPQ8TBZ2 947 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 SCFD1Q8WVM8 642 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 CD101Q93033 1021 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 EXOC4Q96A65 974 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 LOXL4Q96JB6 756 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 ZNF396Q96N95 335 aaPredicted RBP15.7■□□□□ 0.1
SMPD4-216ENST00000461187 TTLL2Q9BWV7 592 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 BACH2Q9BYV9 841 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 ARRDC1-AS1Q9H2J1 176 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 LINC00597Q9H2U6 94 aa15.7■□□□□ 0.1
SMPD4-216ENST00000461187 UBE4BO95155 1302 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 TACC1O75410 805 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 AKAP3O75969 853 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 EPN2O95208 641 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 CCDC192P0DO97 292 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 PFKLP17858 780 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 TNNI1P19237 187 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 GNL1P36915 607 aaPredicted RBP15.69■□□□□ 0.1
SMPD4-216ENST00000461187 CYP2J2P51589 502 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 CYP24A1Q07973 514 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 MDH1BQ5I0G3 518 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 UNC13DQ70J99 1090 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 SYT13Q7L8C5 426 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 NELFCDQ8IXH7 590 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 XXYLT1Q8NBI6 393 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 ZNF516Q92618 1163 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 ZC3H10Q96K80 434 aaKnown RBP15.69■□□□□ 0.1
SMPD4-216ENST00000461187 CNTNAP3BQ96NU0 1288 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 HHIPQ96QV1 700 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 FNBP1Q96RU3 617 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 CGRRF1Q99675 332 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 CNTNAP3Q9BZ76 1288 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 GZF1Q9H116 711 aaPredicted RBP15.69■□□□□ 0.1
SMPD4-216ENST00000461187 TMEM30AQ9NV96 361 aa15.69■□□□□ 0.1
SMPD4-216ENST00000461187 ADAMTS9Q9P2N4 1935 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 ZNF840PA6NDX5 716 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 F8VP50 259 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 TRIM66O15016 1216 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 ADRB1P08588 477 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 FAM163BP0C2L3 166 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 ZNF806P0C7X5 589 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 ANXA13P27216 316 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 CASP1P29466 404 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 PDE6CP51160 858 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 SNRPFP62306 86 aaKnown RBP15.68■□□□□ 0.1
SMPD4-216ENST00000461187 NOP14P78316 857 aaKnown RBP15.68■□□□□ 0.1
SMPD4-216ENST00000461187 NR1H3Q13133 447 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 SF3A2Q15428 464 aaKnown RBP15.68■□□□□ 0.1
SMPD4-216ENST00000461187 CCDC6Q16204 474 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 PPM1JQ5JR12 505 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 CCDC127Q96BQ5 260 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 C8orf48Q96LL4 319 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 RNF38Q9H0F5 515 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 SNX25Q9H3E2 840 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 DPEP3Q9H4B8 488 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 TRPM5Q9NZQ8 1165 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 PCNX2A6NKB5 2137 aa15.68■□□□□ 0.1
SMPD4-216ENST00000461187 LEFTY2O00292 366 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 POLR2DO15514 142 aaKnown RBP15.67■□□□□ 0.1
SMPD4-216ENST00000461187 NFATC1O95644 943 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 OLFM2O95897 454 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 PTPN1P18031 435 aaKnown RBP15.67■□□□□ 0.1
SMPD4-216ENST00000461187 OPRD1P41143 372 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 LIMK1P53667 647 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 CACNA2D1P54289 1103 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 SLC7A9P82251 487 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 PSMD2Q13200 908 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 DMC1Q14565 340 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 BMT2Q1RMZ1 405 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 GAB4Q2WGN9 574 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 WDR72Q3MJ13 1102 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 PLA2G2CQ5R387 149 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 HS2ST1Q7LGA3 356 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 C12orf56Q8IXR9 622 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 OR6B3Q8NGW1 331 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 XYLT2Q9H1B5 865 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 BLZF1Q9H2G9 400 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 MAGEF1Q9HAY2 307 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 EHD2Q9NZN4 543 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 EBF1Q9UH73 591 aa15.67■□□□□ 0.1
SMPD4-216ENST00000461187 K7EQS6 105 aa15.66■□□□□ 0.1
SMPD4-216ENST00000461187 APBB3O95704 486 aa15.66■□□□□ 0.1
SMPD4-216ENST00000461187 STAU1O95793 577 aaKnown RBP15.66■□□□□ 0.1
SMPD4-216ENST00000461187 OAS1P00973 400 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms