RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 MAPRE1Q15691 268 aaKnown RBP13.36□□□□□ -0.27
HDAC4-207ENST00000461113 NFE2Q16621 373 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-207ENST00000461113 MAN2A1Q16706 1144 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 PPM1LQ5SGD2 360 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 STPG1Q5TH74 334 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 SLC8B1Q6J4K2 584 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 C11orf57Q6ZUT1 292 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-207ENST00000461113 CEP68Q76N32 757 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 RTL10Q7L3V2 364 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 NPAS3Q8IXF0 933 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 ZNF461Q8TAF7 563 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 TAS1R2Q8TE23 839 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 ING5Q8WYH8 240 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 BPIFA3Q9BQP9 254 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 ACBD6Q9BR61 282 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 IER2Q9BTL4 223 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 CYP3A43Q9HB55 503 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 FBXW11Q9UKB1 542 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 L1RE1Q9UN81 338 aa13.36□□□□□ -0.27
HDAC4-207ENST00000461113 GOLGA6L19H0YKK7 550 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 MAN2B1O00754 1011 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 AXIN1O15169 862 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 TACC1O75410 805 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 VNN1O95497 513 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 SPINK2P20155 84 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 WARSP23381 471 aaKnown RBP13.35□□□□□ -0.27
HDAC4-207ENST00000461113 CNR2P34972 360 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 SOWAHAQ2M3V2 549 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 UVSSAQ2YD98 709 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 CBWD6Q4V339 395 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 TCP11X2Q5H9J9 407 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 CBWD3Q5JTY5 395 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 CBWD5Q5RIA9 395 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 FKBP15Q5T1M5 1219 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 HEATR6Q6AI08 1181 aaKnown RBP13.35□□□□□ -0.27
HDAC4-207ENST00000461113 PSAPL1Q6NUJ1 521 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 SCARA5Q6ZMJ2 495 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 ELMOD1Q8N336 334 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 AOPEPQ8N6M6 819 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 C2orf15Q8WU43 125 aaKnown RBP13.35□□□□□ -0.27
HDAC4-207ENST00000461113 TNIP3Q96KP6 325 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 FAM81BQ96LP2 452 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 NT5C1BQ96P26 610 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 TUBGCP2Q9BSJ2 902 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 ANP32EQ9BTT0 268 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 LSM14BQ9BX40 385 aaKnown RBP13.35□□□□□ -0.27
HDAC4-207ENST00000461113 NIF3L1Q9GZT8 377 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 XYLT2Q9H1B5 865 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 ARRDC1-AS1Q9H2J1 176 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 HCFC1R1Q9NWW0 138 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 AFF4Q9UHB7 1163 aaKnown RBP13.35□□□□□ -0.27
HDAC4-207ENST00000461113 CDH9Q9ULB4 789 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 COQ4Q9Y3A0 265 aa13.35□□□□□ -0.27
HDAC4-207ENST00000461113 A8MXQ7 604 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 XYLBO75191 536 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 C8AP07357 584 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 TBXAS1P24557 533 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-207ENST00000461113 ROR1Q01973 937 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 FOXC1Q12948 553 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 GPR17Q13304 367 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 PLD1Q13393 1074 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 VWA3BQ502W6 1294 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 HSP90AA4PQ58FG1 418 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 TANGO2Q6ICL3 276 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 GBP6Q6ZN66 633 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 C4orf50Q6ZRC1 276 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 LONP2Q86WA8 852 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 DNASE1L2Q92874 299 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 MCRS1Q96EZ8 462 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 MED15Q96RN5 788 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 PI4K2AQ9BTU6 479 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 TMEM121BQ9BXQ6 578 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-207ENST00000461113 FAM124BQ9H5Z6 455 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-207ENST00000461113 CYP4F11Q9HBI6 524 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.34□□□□□ -0.27
HDAC4-207ENST00000461113 SAMSN1Q9NSI8 373 aaKnown RBP13.34□□□□□ -0.27
HDAC4-207ENST00000461113 FANCLQ9NW38 375 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 IGF2RP11717 2491 aa13.34□□□□□ -0.27
HDAC4-207ENST00000461113 TRIP11Q15643 1979 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 GTPBP10A4D1E9 387 aaKnown RBP13.33□□□□□ -0.28
HDAC4-207ENST00000461113 TMEM8BA6NDV4 472 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 GABRDO14764 452 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 ZIC2O95409 532 aaPredicted RBP13.33□□□□□ -0.28
HDAC4-207ENST00000461113 LRG1P02750 347 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 PDGFRBP09619 1106 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 ZNF806P0C7X5 589 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 ATF2P15336 505 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 ALDH1A3P47895 512 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 TUFMP49411 452 aaKnown RBP13.33□□□□□ -0.28
HDAC4-207ENST00000461113 GAS6Q14393 721 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 GRM2Q14416 872 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 FILIP1LQ4L180 1135 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 PABPC1LQ4VXU2 614 aaKnown RBP13.33□□□□□ -0.28
HDAC4-207ENST00000461113 SLC39A12Q504Y0 691 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 INTS6LQ5JSJ4 861 aaKnown RBP13.33□□□□□ -0.28
HDAC4-207ENST00000461113 SPOPLQ6IQ16 392 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 UNC93AQ86WB7 457 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 SPATA2LQ8IUW3 424 aaPredicted RBP13.33□□□□□ -0.28
HDAC4-207ENST00000461113 EHBP1Q8NDI1 1231 aa13.33□□□□□ -0.28
HDAC4-207ENST00000461113 FAM3CQ92520 227 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms