RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 MCRS1Q96EZ8 462 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.74■□□□□ 0.437e-8■■□□□ 13.4
NELFCD-201ENST00000460601 USTQ9Y2C2 406 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 OAZ2O95190 189 aa17.73■□□□□ 0.43
NELFCD-201ENST00000460601 SLU7O95391 586 aaKnown RBP17.73■□□□□ 0.43
NELFCD-201ENST00000460601 FAM200BP0CF97 657 aa17.73■□□□□ 0.43
NELFCD-201ENST00000460601 CAPN2P17655 700 aa17.73■□□□□ 0.43
NELFCD-201ENST00000460601 NDUFV1P49821 464 aa17.73■□□□□ 0.43
NELFCD-201ENST00000460601 ADIGQ0VDE8 80 aa17.73■□□□□ 0.43
NELFCD-201ENST00000460601 ZNF211Q13398 564 aaPredicted RBP17.73■□□□□ 0.43
NELFCD-201ENST00000460601 BTG3Q14201 252 aaPredicted RBP17.73■□□□□ 0.43
NELFCD-201ENST00000460601 SLC39A12Q504Y0 691 aa17.73■□□□□ 0.43
NELFCD-201ENST00000460601 RSPO2Q6UXX9 243 aaPredicted RBP17.73■□□□□ 0.43
NELFCD-201ENST00000460601 FAM43BQ6ZT52 329 aaPredicted RBP17.73■□□□□ 0.43
NELFCD-201ENST00000460601 THEM5Q8N1Q8 247 aa17.73■□□□□ 0.43
NELFCD-201ENST00000460601 PGLYRP2Q96PD5 576 aa17.73■□□□□ 0.43
NELFCD-201ENST00000460601 TMEM175Q9BSA9 504 aa17.73■□□□□ 0.43
NELFCD-201ENST00000460601 MRPL42Q9Y6G3 142 aaKnown RBP17.73■□□□□ 0.43
NELFCD-201ENST00000460601 SIGLEC16A6NMB1 481 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 XPO1O14980 1071 aaKnown RBP17.72■□□□□ 0.43
NELFCD-201ENST00000460601 SETSIPP0DME0 302 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 TCP1P17987 556 aaKnown RBP17.72■□□□□ 0.43
NELFCD-201ENST00000460601 FLT3P36888 993 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 GSCP56915 257 aaPredicted RBP17.72■□□□□ 0.43
NELFCD-201ENST00000460601 ZNF268Q14587 947 aaPredicted RBP17.72■□□□□ 0.43
NELFCD-201ENST00000460601 RAB6CQ53S08 254 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 MSANTD4Q8NCY6 345 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 STKLD1Q8NE28 680 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 YME1L1Q96TA2 773 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 RAB6CQ9H0N0 254 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 NLRC5Q86WI3 1866 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 SYN3O14994 580 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 BAIAP3O94812 1187 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 PROSCO94903 275 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 FGBP02675 491 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 PRLRP16471 622 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 FGFR3P22607 806 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 TAS2R40P59535 323 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 TSPY1Q01534 308 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 LLGL1Q15334 1064 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 SH3PXD2AQ5TCZ1 1133 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 KCNT2Q6UVM3 1135 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 PRSS55Q6UWB4 352 aaPredicted RBP17.72■□□□□ 0.43
NELFCD-201ENST00000460601 KHSRPQ92945 711 aaKnown RBP eCLIP17.72■□□□□ 0.433e-8■■■□□ 16.9
NELFCD-201ENST00000460601 DNAI2Q9GZS0 605 aa17.72■□□□□ 0.43
NELFCD-201ENST00000460601 RNF216Q9NWF9 866 aaPredicted RBP17.72■□□□□ 0.43
NELFCD-201ENST00000460601 UQCRHLA0A096LP55 91 aa17.71■□□□□ 0.43
NELFCD-201ENST00000460601 UQCRHP07919 91 aa17.71■□□□□ 0.43
NELFCD-201ENST00000460601 PAX3P23760 479 aa17.71■□□□□ 0.43
NELFCD-201ENST00000460601 CYP2F1P24903 491 aa17.71■□□□□ 0.43
NELFCD-201ENST00000460601 GJC1P36383 396 aa17.71■□□□□ 0.43
NELFCD-201ENST00000460601 ARPP19P56211 112 aa17.71■□□□□ 0.43
NELFCD-201ENST00000460601 CTXN3Q4LDR2 81 aa17.71■□□□□ 0.43
NELFCD-201ENST00000460601 TMEM240Q5SV17 173 aa17.71■□□□□ 0.43
NELFCD-201ENST00000460601 SPATA18Q8TC71 538 aa17.71■□□□□ 0.43
NELFCD-201ENST00000460601 STK32AQ8WU08 396 aa17.71■□□□□ 0.43
NELFCD-201ENST00000460601 SMARCD1Q96GM5 515 aa17.71■□□□□ 0.43
NELFCD-201ENST00000460601 WDR35Q9P2L0 1181 aa17.71■□□□□ 0.43
NELFCD-201ENST00000460601 C2CD2LO14523 706 aa17.71■□□□□ 0.42
NELFCD-201ENST00000460601 RPL34P49207 117 aaKnown RBP17.71■□□□□ 0.42
NELFCD-201ENST00000460601 PPIGQ13427 754 aaKnown RBP eCLIP17.71■□□□□ 0.423e-7■■■□□ 15.4
NELFCD-201ENST00000460601 WHAMMP3Q1A5X7 153 aa17.71■□□□□ 0.42
NELFCD-201ENST00000460601 TXNRD3NBQ6F5E7 133 aa17.71■□□□□ 0.42
NELFCD-201ENST00000460601 TTC9BQ8N6N2 239 aa17.71■□□□□ 0.42
NELFCD-201ENST00000460601 ARFGAP1Q8N6T3 406 aa17.71■□□□□ 0.42
NELFCD-201ENST00000460601 MNS1Q8NEH6 495 aa17.71■□□□□ 0.42
NELFCD-201ENST00000460601 IGSF21Q96ID5 467 aa17.71■□□□□ 0.42
NELFCD-201ENST00000460601 CFAP57Q96MR6 1250 aa17.71■□□□□ 0.42
NELFCD-201ENST00000460601 ZCWPW1Q9H0M4 648 aa17.71■□□□□ 0.42
NELFCD-201ENST00000460601 ABI2Q9NYB9 513 aaPredicted RBP17.71■□□□□ 0.42
NELFCD-201ENST00000460601 TMEM59LQ9UK28 342 aa17.71■□□□□ 0.42
NELFCD-201ENST00000460601 ARHGEF37A1IGU5 675 aa17.7■□□□□ 0.42
NELFCD-201ENST00000460601 RPL17P18621 184 aaKnown RBP17.7■□□□□ 0.42
NELFCD-201ENST00000460601 PSMA2P25787 234 aa17.7■□□□□ 0.42
NELFCD-201ENST00000460601 CTNNA1P35221 906 aaKnown RBP17.7■□□□□ 0.42
NELFCD-201ENST00000460601 SSR1P43307 286 aaKnown RBP17.7■□□□□ 0.42
NELFCD-201ENST00000460601 PEX5P50542 639 aa17.7■□□□□ 0.42
NELFCD-201ENST00000460601 SLC8A3P57103 927 aa17.7■□□□□ 0.42
NELFCD-201ENST00000460601 MRPL58Q14197 206 aaKnown RBP17.7■□□□□ 0.42
NELFCD-201ENST00000460601 KCTD19Q17RG1 926 aaPredicted RBP17.7■□□□□ 0.42
NELFCD-201ENST00000460601 ACSF2Q96CM8 615 aaPredicted RBP17.7■□□□□ 0.42
NELFCD-201ENST00000460601 KLHL11Q9NVR0 708 aa17.7■□□□□ 0.42
NELFCD-201ENST00000460601 IP6K2Q9UHH9 426 aa17.7■□□□□ 0.42
NELFCD-201ENST00000460601 HHLA1C9JL84 531 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 CEP104O60308 925 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 EFCAB14O75071 495 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 GJB5O95377 273 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 TFE3P19532 575 aaPredicted RBP17.69■□□□□ 0.42
NELFCD-201ENST00000460601 SLC6A3Q01959 620 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 ADCY1Q08828 1119 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 CDO1Q16878 200 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 C15orf59Q2T9L4 293 aaPredicted RBP17.69■□□□□ 0.42
NELFCD-201ENST00000460601 ATP13A4Q4VNC1 1196 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 CALR3Q96L12 384 aaKnown RBP17.69■□□□□ 0.42
NELFCD-201ENST00000460601 TTPALQ9BTX7 342 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 ADAM33Q9BZ11 813 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 EPC1Q9H2F5 836 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 PTPRDP23468 1912 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 ADAM12O43184 909 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 EFEMP2O95967 443 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms