RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 FUKQ8N0W3 1084 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 SIX6OS1Q8N1H7 587 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 ARHGAP18Q8N392 663 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 TMEM130Q8N3G9 435 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 C12orf29Q8N999 325 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 ATAD1Q8NBU5 361 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 PDZD8Q8NEN9 1154 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 CMASQ8NFW8 434 aaPredicted RBP11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 SLC7A14Q8TBB6 771 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 EPS8L1Q8TE68 723 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 ELMO3Q96BJ8 720 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 TRIM11Q96F44 468 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 FAM161BQ96MY7 647 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 SLITRK1Q96PX8 696 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 TWNKQ96RR1 684 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 CDX2Q99626 313 aaPredicted RBP11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 PKMYT1Q99640 499 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 AGPAT1Q99943 283 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 B3GNT5Q9BYG0 378 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 RHOBTB2Q9BYZ6 727 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 IGFLR1Q9H665 355 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 PIDD1Q9HB75 910 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 CSNK1G1Q9HCP0 422 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 MAN1C1Q9NR34 630 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 FAM49BQ9NUQ9 324 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 SEPT11Q9NVA2 429 aaKnown RBP11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 STRIP2Q9ULQ0 834 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 TDRD15B5MCY1 1934 aaKnown RBP11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 EPOPA6NHQ4 379 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 ZNF197O14709 1029 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 PER2O15055 1255 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 AKR1B10O60218 316 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 ATP2C2O75185 946 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 FBXO21O94952 628 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 OR4Q2P0C623 313 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 CCDC130P13994 396 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 BRD2P25440 801 aaKnown RBP11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 CYLC1P35663 651 aaPredicted RBP11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 NSFP46459 744 aaKnown RBP11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 FXR1P51114 621 aaKnown RBP eCLIP11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 CCDC173Q0VFZ6 552 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 SKIV2LQ15477 1246 aaKnown RBP11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 SPA17Q15506 151 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 C10orf76Q5T2E6 689 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 RSPO2Q6UXX9 243 aaPredicted RBP11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 IRF2BP2Q7Z5L9 587 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 SPRED2Q7Z698 418 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 TADA2BQ86TJ2 420 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 LRRTM3Q86VH5 581 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 NUP93Q8N1F7 819 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 SLC22A17Q8WUG5 538 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 KCTD13Q8WZ19 329 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 PABPC5Q96DU9 382 aaKnown RBP11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 RIPOR3Q96MK2 946 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 CDK5RAP1Q96SZ6 601 aaKnown RBP11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 GPR88Q9GZN0 384 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 HMGXB4Q9UGU5 601 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 COG5Q9UP83 839 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 INSL5Q9Y5Q6 135 aa11.64□□□□□ -0.55
SMNDC1-203ENST00000460483 ANKRD62A6NC57 917 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 SOBPA7XYQ1 873 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 RNF225M0QZC1 329 aaPredicted RBP11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 ADAM12O43184 909 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 MICAL2O94851 1124 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 GZMAP12544 262 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 PTPN2P17706 415 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 CYP2F1P24903 491 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 PLA2G4AP47712 749 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 ADKP55263 362 aaKnown RBP11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 MAP3K7CLP57077 242 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 TWF1Q12792 350 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 HYAL1Q12794 435 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 ORC1Q13415 861 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 ADAM15Q13444 863 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 DSG2Q14126 1118 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 AAK1Q2M2I8 961 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 PUS10Q3MIT2 529 aaKnown RBP11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 ATAT1Q5SQI0 421 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 EP400NLQ6ZTU2 488 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 TOGARAM2Q6ZUX3 1019 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 ERICH1Q86X53 443 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 MICALL1Q8N3F8 863 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 SPC24Q8NBT2 197 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 STKLD1Q8NE28 680 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 OVCA2Q8WZ82 227 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 VCPIP1Q96JH7 1222 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 NECTIN4Q96NY8 510 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 TMEM209Q96SK2 561 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 PRKD2Q9BZL6 878 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 HAUS4Q9H6D7 363 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 CNGB3Q9NQW8 809 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 ASAH2Q9NR71 780 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 ST7Q9NRC1 585 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 MTMR10Q9NXD2 777 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 WDR35Q9P2L0 1181 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 SLC27A5Q9Y2P5 690 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 YIPF1Q9Y548 306 aa11.63□□□□□ -0.55
SMNDC1-203ENST00000460483 CLUHO75153 1309 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 CCDC195A0A1B0GUA6 201 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms