RNA–Protein interactions for RNA: ENST00000459931.1

NCDN-206, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 1,041 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-206ENST00000459931 EHD2Q9NZN4 543 aa16.73■□□□□ 0.27
NCDN-206ENST00000459931 TRPM5Q9NZQ8 1165 aa16.73■□□□□ 0.27
NCDN-206ENST00000459931 CGNQ9P2M7 1197 aaKnown RBP16.73■□□□□ 0.27
NCDN-206ENST00000459931 SLC8A2Q9UPR5 921 aa16.73■□□□□ 0.27
NCDN-206ENST00000459931 A0A1W2PQ27 194 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 A0A1W2PQ64 194 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 A0A1W2PQD8 194 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 MED19A0JLT2 244 aaPredicted RBP16.72■□□□□ 0.27
NCDN-206ENST00000459931 EXOC3O60645 756 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 PHACTR2O75167 634 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 TACC1O75410 805 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 EGFP01133 1207 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 DRD1P21728 446 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 PXNP49023 591 aaPredicted RBP16.72■□□□□ 0.27
NCDN-206ENST00000459931 ATXN1P54253 815 aaKnown RBP16.72■□□□□ 0.27
NCDN-206ENST00000459931 EHHADHQ08426 723 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 NR1H3Q13133 447 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 KNOP1Q1ED39 458 aaKnown RBP16.72■□□□□ 0.27
NCDN-206ENST00000459931 MDH1BQ5I0G3 518 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 PKN3Q6P5Z2 889 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 WDR5BQ86VZ2 330 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 SH3RF2Q8TEC5 729 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 CHFRQ96EP1 664 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 PAGE5Q96GU1 130 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 MRPL45Q9BRJ2 306 aaKnown RBP16.72■□□□□ 0.27
NCDN-206ENST00000459931 GOLPH3LQ9H4A5 285 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 FBRSL1Q9HCM7 1045 aaKnown RBP16.72■□□□□ 0.27
NCDN-206ENST00000459931 NXF1Q9UBU9 619 aaKnown RBP16.72■□□□□ 0.27
NCDN-206ENST00000459931 WNT6Q9Y6F9 365 aa16.72■□□□□ 0.27
NCDN-206ENST00000459931 CEP250Q9BV73 2442 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 ZNF638Q14966 1978 aaKnown RBP16.71■□□□□ 0.27
NCDN-206ENST00000459931 TRIM66O15016 1216 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 LRP3O75074 770 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 RNF40O75150 1001 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 CLSTN1O94985 981 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 ABL1P00519 1130 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 FAM163BP0C2L3 166 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 PTPN1P18031 435 aaKnown RBP16.71■□□□□ 0.27
NCDN-206ENST00000459931 HOXC13P31276 330 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 SYKP43405 635 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 MYL6P60660 151 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 ZNF77Q15935 545 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 FBXO43Q4G163 708 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 ZNF516Q92618 1163 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 SYAP1Q96A49 352 aaPredicted RBP16.71■□□□□ 0.27
NCDN-206ENST00000459931 LINC00597Q9H2U6 94 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 SEMA4GQ9NTN9 838 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 GCNT4Q9P109 453 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 CACNA1AO00555 2505 aa16.71■□□□□ 0.27
NCDN-206ENST00000459931 KIF26AQ9ULI4 1882 aaPredicted RBP16.7■□□□□ 0.26
NCDN-206ENST00000459931 A8MXQ7 604 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 F8VP50 259 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 KLRC4O43908 158 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 ATICP31939 592 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 PPP3CCP48454 512 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 USP46P62068 366 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 PSMD2Q13200 908 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 BMT2Q1RMZ1 405 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 EML3Q32P44 896 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 TDRD10Q5VZ19 366 aaKnown RBP16.7■□□□□ 0.26
NCDN-206ENST00000459931 C12orf56Q8IXR9 622 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 FAM160A2Q8N612 972 aaPredicted RBP16.7■□□□□ 0.26
NCDN-206ENST00000459931 GOLGA5Q8TBA6 731 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 CD101Q93033 1021 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 USP25Q9UHP3 1055 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 ARHGAP26Q9UNA1 814 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.7■□□□□ 0.26
NCDN-206ENST00000459931 DENND4CQ5VZ89 1909 aa16.7■□□□□ 0.26
NCDN-206ENST00000459931 DCDC2BA2VCK2 349 aa16.69■□□□□ 0.26
NCDN-206ENST00000459931 RPP40O75818 363 aaKnown RBP16.69■□□□□ 0.26
NCDN-206ENST00000459931 CCDC192P0DO97 292 aa16.69■□□□□ 0.26
NCDN-206ENST00000459931 PFKLP17858 780 aa16.69■□□□□ 0.26
NCDN-206ENST00000459931 NOP14P78316 857 aaKnown RBP16.69■□□□□ 0.26
NCDN-206ENST00000459931 USP4Q13107 963 aa16.69■□□□□ 0.26
NCDN-206ENST00000459931 BIRC3Q13489 604 aa16.69■□□□□ 0.26
NCDN-206ENST00000459931 NAIF1Q69YI7 327 aaPredicted RBP16.69■□□□□ 0.26
NCDN-206ENST00000459931 CAMKK1Q8N5S9 505 aa16.69■□□□□ 0.26
NCDN-206ENST00000459931 C8orf48Q96LL4 319 aa16.69■□□□□ 0.26
NCDN-206ENST00000459931 RTKNQ9BST9 563 aa16.69■□□□□ 0.26
NCDN-206ENST00000459931 ELOVL4Q9GZR5 314 aa16.69■□□□□ 0.26
NCDN-206ENST00000459931 DPEP3Q9H4B8 488 aa16.69■□□□□ 0.26
NCDN-206ENST00000459931 CCDC163A0A0D9SF12 145 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.68■□□□□ 0.26
NCDN-206ENST00000459931 ZNF840PA6NDX5 716 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 LEFTY2O00292 366 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 AXIN1O15169 862 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 ZNF202O95125 648 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 NFATC1O95644 943 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 STAU1O95793 577 aaKnown RBP16.68■□□□□ 0.26
NCDN-206ENST00000459931 PRR29P0C7W0 189 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 CASP4P49662 377 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 IFRD2Q12894 506 aaPredicted RBP16.68■□□□□ 0.26
NCDN-206ENST00000459931 TAF10Q12962 218 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 CSRP2Q16527 193 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 CACNA2D4Q7Z3S7 1137 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 B3GALNT2Q8NCR0 500 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 RPLP0P6Q8NHW5 317 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 CCDC26Q8TAB7 109 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 GAB3Q8WWW8 586 aa16.68■□□□□ 0.26
NCDN-206ENST00000459931 SLITRK1Q96PX8 696 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms