RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	TEX33	O43247	280 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	AP1G2	O75843	785 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	GABBR2	O75899	941 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	MICAL2	O94851	1124 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	CFH	P08603	1231 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	CSH1	P0DML2	217 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	CSH2	P0DML3	217 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	BRD2	P25440	801 aa	Known RBP	10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	MAP3K7CL	P57077	242 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	CETN1	Q12798	172 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	VEPH1	Q14D04	833 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	ARHGAP44	Q17R89	818 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	PKDCC	Q504Y2	493 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	FAM78A	Q5JUQ0	283 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	KLHDC7A	Q5VTJ3	777 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	ARHGAP17	Q68EM7	881 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	ITIH5	Q86UX2	942 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	GPIHBP1	Q8IV16	184 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	TRMT2B	Q96GJ1	504 aa	Known RBP	10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	HEXIM2	Q96MH2	286 aa	Known RBP	10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	LSM14B	Q9BX40	385 aa	Known RBP	10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	PLA2G2F	Q9BZM2	168 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	DMAP1	Q9NPF5	467 aa	Predicted RBP	10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	IL37	Q9NZH6	218 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	DNAJC12	Q9UKB3	198 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	NR2E1	Q9Y466	385 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	PCDHB4	Q9Y5E5	795 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783	TRIM66	O15016	1216 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	PRAMEF12	O95522	483 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	SLC5A3	P53794	718 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	SYCP1	Q15431	976 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	GOLGA7B	Q2TAP0	167 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	CYP4A22	Q5TCH4	519 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	DENND5B	Q6ZUT9	1274 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	TTC39C	Q8N584	583 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	LEMD2	Q8NC56	503 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	RIN3	Q8TB24	985 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	JAKMIP2	Q96AA8	810 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	LRRC3B	Q96PB8	259 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	SLC22A12	Q96S37	553 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	SLC46A2	Q9BY10	475 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	DUSP16	Q9BY84	665 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	NAT10	Q9H0A0	1025 aa	Known RBP	10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	ATXN3L	Q9H3M9	355 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	KCNK12	Q9HB15	430 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	TSPAN16	Q9UKR8	245 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	NUMBL	Q9Y6R0	609 aa		10.87	□□□□□ -0.67
MRPL55-223	ENST00000459783	BDP1	A6H8Y1	2624 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	FAM92A	A1XBS5	289 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	C2orf78	A6NCI8	922 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	TNFRSF10A	O00220	468 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	FOXN3	O00409	490 aa	Predicted RBP	10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	PES1	O00541	588 aa	Known RBP	10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	ZNF197	O14709	1029 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	NARS	O43776	548 aa	Known RBP	10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	PAEP	P09466	180 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	FAM200B	P0CF97	657 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	VDR	P11473	427 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	KRT5	P13647	590 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	UCHL3	P15374	230 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	CD19	P15391	556 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	NPR3	P17342	541 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	CLCN1	P35523	988 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	VIPR2	P41587	438 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	YWHAE	P62258	255 aa	Known RBP	10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	PDE4C	Q08493	712 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	TAF10	Q12962	218 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	SGO2	Q562F6	1265 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	GPR158	Q5T848	1215 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	IER5L	Q5T953	404 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	TXNDC8	Q6A555	127 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	TANGO2	Q6ICL3	276 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	LCLAT1	Q6UWP7	414 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	PLCD3	Q8N3E9	789 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	ANKRD52	Q8NB46	1076 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	UBA3	Q8TBC4	463 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	ACSF2	Q96CM8	615 aa	Predicted RBP	10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	ASB16	Q96NS5	453 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	ERGIC2	Q96RQ1	377 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	KXD1	Q9BQD3	176 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	SMG9	Q9H0W8	520 aa	Known RBP	10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	EPHX3	Q9H6B9	360 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	RTN4	Q9NQC3	1192 aa	Known RBP	10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	GDE1	Q9NZC3	331 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	GREB1	Q4ZG55	1949 aa		10.86	□□□□□ -0.67
MRPL55-223	ENST00000459783	ATP8B3	O60423	1300 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783		A0A1B0GTH6	734 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	ZNF840P	A6NDX5	716 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	SMTNL1	A8MU46	457 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	CYP26A1	O43174	497 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	ZDHHC11B	P0C7U3	371 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	CDK11B	P21127	795 aa	Known RBP	10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	ANXA13	P27216	316 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	CDC25C	P30307	473 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	MFAP3	P55082	362 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	IFRD2	Q12894	506 aa	Predicted RBP	10.85	□□□□□ -0.67

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