RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 BZW2Q9Y6E2 419 aaKnown RBP10.92□□□□□ -0.66
USP39-210ENST00000459775 FNDC1Q4ZHG4 1894 aaPredicted RBP10.92□□□□□ -0.66
USP39-210ENST00000459775 O00370 1275 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 MICAL2O94851 1124 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 FTLP02792 175 aaPredicted RBP10.91□□□□□ -0.66
USP39-210ENST00000459775 ODC1P11926 461 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 WARSP23381 471 aaKnown RBP10.91□□□□□ -0.66
USP39-210ENST00000459775 ARHGAP25P42331 645 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 CACNA2D1P54289 1103 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 MDH1BQ5I0G3 518 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 OVOS1Q6IE37 1185 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 FUT10Q6P4F1 479 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 CHCHD4Q8N4Q1 142 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 SLC2A14Q8TDB8 520 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 COLEC11Q9BWP8 271 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 CASS4Q9NQ75 786 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 TMEM30AQ9NV96 361 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 SUFUQ9UMX1 484 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 TRIM66O15016 1216 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 ADAM12O43184 909 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 TLL1O43897 1013 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 EFCAB14O75071 495 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 BEST1O76090 585 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 LCA5LO95447 670 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 GJB6O95452 261 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 PTPN1P18031 435 aaKnown RBP10.91□□□□□ -0.66
USP39-210ENST00000459775 STIP1P31948 543 aaKnown RBP10.91□□□□□ -0.66
USP39-210ENST00000459775 PBX2P40425 430 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 NOP2P46087 812 aaKnown RBP10.91□□□□□ -0.66
USP39-210ENST00000459775 ARPP19P56211 112 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 YWHAEP62258 255 aaKnown RBP10.91□□□□□ -0.66
USP39-210ENST00000459775 BMS1Q14692 1282 aaKnown RBP10.91□□□□□ -0.66
USP39-210ENST00000459775 SPA17Q15506 151 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 GOLGA7BQ2TAP0 167 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 VARS2Q5ST30 1063 aaKnown RBP10.91□□□□□ -0.66
USP39-210ENST00000459775 PAQR9Q6ZVX9 377 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 KIAA1328Q86T90 577 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 B3GALNT2Q8NCR0 500 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 ARHGEF26Q96DR7 871 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 IGSF21Q96ID5 467 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 SYT15Q9BQS2 421 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 THAP2Q9H0W7 228 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 MSRAQ9UJ68 235 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 TSPAN16Q9UKR8 245 aa10.91□□□□□ -0.66
USP39-210ENST00000459775 MACROD2A1Z1Q3 448 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 M0QYV0 167 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 PAEPP09466 180 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 UNGP13051 313 aaPredicted RBP10.9□□□□□ -0.66
USP39-210ENST00000459775 RGS7P49802 495 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 GALCP54803 685 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 BPIFB4P59827 614 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 HTRA4P83105 476 aaPredicted RBP10.9□□□□□ -0.66
USP39-210ENST00000459775 YWHAHQ04917 246 aaPredicted RBP10.9□□□□□ -0.66
USP39-210ENST00000459775 CLEC16AQ2KHT3 1053 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 SGO2Q562F6 1265 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 RASIP1Q5U651 963 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 FMNL3Q8IVF7 1028 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 FUKQ8N0W3 1084 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 NDUFAF2Q8N183 169 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 COLGALT1Q8NBJ5 622 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 STKLD1Q8NE28 680 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 FRS2Q8WU20 508 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 PGLYRP2Q96PD5 576 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 B3GNT5Q9BYG0 378 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 PCDHB8Q9UN66 801 aa10.9□□□□□ -0.66
USP39-210ENST00000459775 TMEM189-UBE2V1I3L0A0 370 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 BUB1O43683 1085 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 GABBR2O75899 941 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 CYP1A1P04798 512 aaPredicted RBP10.9□□□□□ -0.67
USP39-210ENST00000459775 MSNP26038 577 aaKnown RBP10.9□□□□□ -0.67
USP39-210ENST00000459775 NOMO3P69849 1222 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 CYP4A22Q5TCH4 519 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 MMS22LQ6ZRQ5 1243 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 UNC93AQ86WB7 457 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 CMTR2Q8IYT2 770 aaKnown RBP10.9□□□□□ -0.67
USP39-210ENST00000459775 CRYBG2Q8N1P7 616 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 SLC39A11Q8N1S5 342 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 KIAA1958Q8N8K9 716 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 PCED1BQ96HM7 432 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 FAXDC2Q96IV6 333 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 C16orf45Q96MC5 204 aaPredicted RBP10.9□□□□□ -0.67
USP39-210ENST00000459775 ZNF558Q96NG5 402 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 KCNK16Q96T55 309 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 C11orf70Q9BRQ4 267 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 TMEM175Q9BSA9 504 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 C17orf80Q9BSJ5 609 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 ZNF518BQ9C0D4 1074 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 IQCGQ9H095 443 aaKnown RBP10.9□□□□□ -0.67
USP39-210ENST00000459775 GOLPH3Q9H4A6 298 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 CERS4Q9HA82 394 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 MYO1AQ9UBC5 1043 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 GUCA1BQ9UMX6 200 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 PCDHGC5Q9Y5F6 944 aa10.9□□□□□ -0.67
USP39-210ENST00000459775 CYP11A1P05108 521 aa10.89□□□□□ -0.67
USP39-210ENST00000459775 TCEAL1Q15170 157 aa10.89□□□□□ -0.67
USP39-210ENST00000459775 DNAJC21Q5F1R6 531 aaKnown RBP10.89□□□□□ -0.67
USP39-210ENST00000459775 VPS36Q86VN1 386 aa10.89□□□□□ -0.67
USP39-210ENST00000459775 METTL23Q86XA0 190 aa10.89□□□□□ -0.67
USP39-210ENST00000459775 TMEM86AQ8N2M4 240 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms