RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CFHP08603 1231 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 KRT19P08727 400 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 CYP2C8P10632 490 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 RBP3P10745 1247 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 RFC1P35251 1148 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 MAGEA6P43360 314 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 SLC8A3P57103 927 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 OGDHQ02218 1023 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 CDK18Q07002 472 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 MOGSQ13724 837 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 TMEM132DQ14C87 1099 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 NOMO1Q15155 1222 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 LLGL1Q15334 1064 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 ZKSCAN8Q15776 578 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 WDR72Q3MJ13 1102 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 C2CD6Q53TS8 623 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 TMEM63BQ5T3F8 832 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 LLGL2Q6P1M3 1020 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 LCLAT1Q6UWP7 414 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 BZW1Q7L1Q6 419 aaKnown RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 ASRGL1Q7L266 308 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 ARCQ7LC44 396 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 PNMA8AQ86V59 439 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 ZNF410Q86VK4 478 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 SESTD1Q86VW0 696 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 CEP57Q86XR8 500 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 CDKL3Q8IVW4 592 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 SULF1Q8IWU6 871 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 WDTC1Q8N5D0 677 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 STK32AQ8WU08 396 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 TFAP2BQ92481 460 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 CPT1BQ92523 772 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 DCPSQ96C86 337 aaKnown RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 NLRP4Q96MN2 994 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 PAFAH2Q99487 392 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 ZNF670Q9BS34 389 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 TMEM121Q9BTD3 319 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 NT5C1AQ9BXI3 368 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 GCOM2Q9BZD3 368 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 IQCGQ9H095 443 aaKnown RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 ZWILCHQ9H900 591 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 METTL5Q9NRN9 209 aaKnown RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 KLHL11Q9NVR0 708 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 MKS1Q9NXB0 559 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 BTBD7Q9P203 1132 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 NXF1Q9UBU9 619 aaKnown RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 XPO7Q9UIA9 1087 aaKnown RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 RABGEF1Q9UJ41 708 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 PNMA3Q9UL41 463 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 LCTP09848 1927 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 BCLAF3A2AJT9 711 aaKnown RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 ZBTB42B2RXF5 422 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 M0QYV0 167 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 IGF2BP3O00425 579 aaKnown RBP eCLIP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 APOL1O14791 398 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 KLF11O14901 512 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 PPP1R12AO14974 1030 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 MDM4O15151 490 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 USP2O75604 605 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 TRUB2O95900 331 aaKnown RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 CALCAP01258 141 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 MT-ND3P03897 115 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 EDN1P05305 212 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 CETPP11597 493 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 KRT4P19013 534 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 CNTFP26441 200 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 GCAP28676 217 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 MIPP30301 263 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 RPL22P35268 128 aaKnown RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 NR2C2P49116 596 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 WDR4P57081 412 aaKnown RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 CCNA1P78396 465 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 SARNPP82979 210 aaKnown RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 ZNF200P98182 395 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 CDK16Q00536 496 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 PPIL2Q13356 520 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 NAB1Q13506 487 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 MPP2Q14168 576 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 KRT81Q14533 505 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 PKN2Q16513 984 aaKnown RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 SPRED3Q2MJR0 410 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 ZNF394Q53GI3 561 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 UBAP2Q5T6F2 1119 aaKnown RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 FAM102AQ5T9C2 384 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 CYP4A22Q5TCH4 519 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 EFCAB12Q6NXP0 572 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 CCDC62Q6P9F0 684 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 DARS2Q6PI48 645 aaKnown RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 SCARA5Q6ZMJ2 495 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 GADL1Q6ZQY3 521 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 C3orf62Q6ZUJ4 267 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 TBC1D1Q86TI0 1168 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 ECHDC2Q86YB7 292 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 HACE1Q8IYU2 909 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 ANKRD13AQ8IZ07 590 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 CYP4X1Q8N118 509 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 ARHGAP24Q8N264 748 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 C1orf127Q8N9H9 656 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 MCUQ8NE86 351 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms