RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 TMEM199Q8N511 208 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 FAN1Q9Y2M0 1017 aa25.71■■□□□ 1.71
U2AF1-204ENST00000459639 PIK3R2O00459 728 aa25.7■■□□□ 1.7
U2AF1-204ENST00000459639 PAPSS1O43252 624 aaPredicted RBP25.7■■□□□ 1.7
U2AF1-204ENST00000459639 GABBR2O75899 941 aa25.7■■□□□ 1.7
U2AF1-204ENST00000459639 TSPY1Q01534 308 aa25.7■■□□□ 1.7
U2AF1-204ENST00000459639 SLC6A3Q01959 620 aa25.7■■□□□ 1.7
U2AF1-204ENST00000459639 C2orf54Q08AI8 447 aa25.7■■□□□ 1.7
U2AF1-204ENST00000459639 CLEC20AQ6ZU45 233 aa25.7■■□□□ 1.7
U2AF1-204ENST00000459639 UBE2Q1Q7Z7E8 422 aa25.7■■□□□ 1.7
U2AF1-204ENST00000459639 PIGZQ86VD9 579 aa25.7■■□□□ 1.7
U2AF1-204ENST00000459639 NOA1Q8NC60 698 aaKnown RBP25.7■■□□□ 1.7
U2AF1-204ENST00000459639 OR10T2Q8NGX3 314 aa25.7■■□□□ 1.7
U2AF1-204ENST00000459639 KCTD13Q8WZ19 329 aa25.7■■□□□ 1.7
U2AF1-204ENST00000459639 SMARCD1Q96GM5 515 aa25.7■■□□□ 1.7
U2AF1-204ENST00000459639 MARCH5Q9NX47 278 aa25.7■■□□□ 1.7
U2AF1-204ENST00000459639 ALPK3Q96L96 1907 aa25.69■■□□□ 1.7
U2AF1-204ENST00000459639 PATJQ8NI35 1801 aa25.69■■□□□ 1.7
U2AF1-204ENST00000459639 DGKIO75912 1065 aa25.69■■□□□ 1.7
U2AF1-204ENST00000459639 OAZ2O95190 189 aa25.69■■□□□ 1.7
U2AF1-204ENST00000459639 CSF2RAP15509 400 aa25.69■■□□□ 1.7
U2AF1-204ENST00000459639 PSMA2P25787 234 aa25.69■■□□□ 1.7
U2AF1-204ENST00000459639 SEL1L2Q5TEA6 688 aa25.69■■□□□ 1.7
U2AF1-204ENST00000459639 MMGT1Q8N4V1 131 aa25.69■■□□□ 1.7
U2AF1-204ENST00000459639 MYLPFQ96A32 169 aa25.69■■□□□ 1.7
U2AF1-204ENST00000459639 NAP1L3Q99457 506 aaPredicted RBP25.69■■□□□ 1.7
U2AF1-204ENST00000459639 PLVAPQ9BX97 442 aa25.69■■□□□ 1.7
U2AF1-204ENST00000459639 TMEM59LQ9UK28 342 aa25.69■■□□□ 1.7
U2AF1-204ENST00000459639 USTQ9Y2C2 406 aa25.69■■□□□ 1.7
U2AF1-204ENST00000459639 AMHP03971 560 aa25.68■■□□□ 1.7
U2AF1-204ENST00000459639 TAS2R40P59535 323 aa25.68■■□□□ 1.7
U2AF1-204ENST00000459639 ACAP1Q15027 740 aa25.68■■□□□ 1.7
U2AF1-204ENST00000459639 CC2D1AQ6P1N0 951 aaPredicted RBP25.68■■□□□ 1.7
U2AF1-204ENST00000459639 GPR161Q8N6U8 529 aaKnown RBP25.68■■□□□ 1.7
U2AF1-204ENST00000459639 PIWIL1Q96J94 861 aaKnown RBP25.68■■□□□ 1.7
U2AF1-204ENST00000459639 SF3B1O75533 1304 aaKnown RBP eCLIP25.68■■□□□ 1.76e-6■■■■■ 103.4
U2AF1-204ENST00000459639 F8VP50 259 aa25.68■■□□□ 1.7
U2AF1-204ENST00000459639 AP1G2O75843 785 aa25.68■■□□□ 1.7
U2AF1-204ENST00000459639 UPP2O95045 317 aa25.68■■□□□ 1.7
U2AF1-204ENST00000459639 GALTP07902 379 aa25.68■■□□□ 1.7
U2AF1-204ENST00000459639 GPD1P21695 349 aa25.68■■□□□ 1.7
U2AF1-204ENST00000459639 ELAVL2Q12926 359 aaKnown RBP25.68■■□□□ 1.7
U2AF1-204ENST00000459639 ZNF211Q13398 564 aaPredicted RBP25.68■■□□□ 1.7
U2AF1-204ENST00000459639 LRRC38Q5VT99 294 aa25.68■■□□□ 1.7
U2AF1-204ENST00000459639 EMC1Q8N766 993 aa25.68■■□□□ 1.7
U2AF1-204ENST00000459639 HCSTQ9UBK5 93 aa25.68■■□□□ 1.7
U2AF1-204ENST00000459639 C2CD4BA6NLJ0 364 aa25.67■■□□□ 1.7
U2AF1-204ENST00000459639 BEST1O76090 585 aa25.67■■□□□ 1.7
U2AF1-204ENST00000459639 ZNF143P52747 638 aaPredicted RBP25.67■■□□□ 1.7
U2AF1-204ENST00000459639 RNASE9P60153 205 aaKnown RBP25.67■■□□□ 1.7
U2AF1-204ENST00000459639 DAB2IPQ5VWQ8 1189 aa25.67■■□□□ 1.7
U2AF1-204ENST00000459639 SLC26A9Q7LBE3 791 aa25.67■■□□□ 1.7
U2AF1-204ENST00000459639 ARCQ7LC44 396 aa25.67■■□□□ 1.7
U2AF1-204ENST00000459639 SCUBE3Q8IX30 993 aa25.67■■□□□ 1.7
U2AF1-204ENST00000459639 TOP1MTQ969P6 601 aa25.67■■□□□ 1.7
U2AF1-204ENST00000459639 UBXN6Q9BZV1 441 aa25.67■■□□□ 1.7
U2AF1-204ENST00000459639 RBM12Q9NTZ6 932 aaKnown RBP25.67■■□□□ 1.7
U2AF1-204ENST00000459639 FGGP02679 453 aa25.66■■□□□ 1.7
U2AF1-204ENST00000459639 PYGMP11217 842 aa25.66■■□□□ 1.7
U2AF1-204ENST00000459639 LCP1P13796 627 aa25.66■■□□□ 1.7
U2AF1-204ENST00000459639 MAP3K7CLP57077 242 aa25.66■■□□□ 1.7
U2AF1-204ENST00000459639 KATNAL2Q8IYT4 538 aa25.66■■□□□ 1.7
U2AF1-204ENST00000459639 SMOQ99835 787 aa25.66■■□□□ 1.7
U2AF1-204ENST00000459639 CSNK1G1Q9HCP0 422 aa25.66■■□□□ 1.7
U2AF1-204ENST00000459639 DPYSL4O14531 572 aa25.65■■□□□ 1.7
U2AF1-204ENST00000459639 BAIAP3O94812 1187 aa25.65■■□□□ 1.7
U2AF1-204ENST00000459639 FGFR3P22607 806 aa25.65■■□□□ 1.7
U2AF1-204ENST00000459639 SSR1P43307 286 aaKnown RBP25.65■■□□□ 1.7
U2AF1-204ENST00000459639 VARS2Q5ST30 1063 aaKnown RBP25.65■■□□□ 1.7
U2AF1-204ENST00000459639 FUT10Q6P4F1 479 aa25.65■■□□□ 1.7
U2AF1-204ENST00000459639 TMEM209Q96SK2 561 aa25.65■■□□□ 1.7
U2AF1-204ENST00000459639 CNPY3Q9BT09 278 aa25.65■■□□□ 1.7
U2AF1-204ENST00000459639 LRRC4Q9HBW1 653 aa25.65■■□□□ 1.7
U2AF1-204ENST00000459639 TMLHEQ9NVH6 421 aa25.65■■□□□ 1.7
U2AF1-204ENST00000459639 ASNSD1Q9NWL6 643 aa25.65■■□□□ 1.7
U2AF1-204ENST00000459639 CCDC188H7C350 402 aa25.64■■□□□ 1.7
U2AF1-204ENST00000459639 EN2P19622 333 aaPredicted RBP25.64■■□□□ 1.7
U2AF1-204ENST00000459639 BCAR1P56945 870 aa25.64■■□□□ 1.7
U2AF1-204ENST00000459639 ADIGQ0VDE8 80 aa25.64■■□□□ 1.7
U2AF1-204ENST00000459639 LONRF2Q1L5Z9 754 aa25.64■■□□□ 1.7
U2AF1-204ENST00000459639 FAM171A1Q5VUB5 890 aa25.64■■□□□ 1.7
U2AF1-204ENST00000459639 C4orf50Q6ZRC1 276 aa25.64■■□□□ 1.7
U2AF1-204ENST00000459639 LRRTM3Q86VH5 581 aa25.64■■□□□ 1.7
U2AF1-204ENST00000459639 ZMIZ2Q8NF64 920 aa25.64■■□□□ 1.7
U2AF1-204ENST00000459639 RXFP2Q8WXD0 754 aa25.64■■□□□ 1.7
U2AF1-204ENST00000459639 KHSRPQ92945 711 aaKnown RBP eCLIP25.64■■□□□ 1.7
U2AF1-204ENST00000459639 GPR62Q9BZJ7 368 aa25.64■■□□□ 1.7
U2AF1-204ENST00000459639 ZCWPW1Q9H0M4 648 aa25.64■■□□□ 1.7
U2AF1-204ENST00000459639 IL23AQ9NPF7 189 aa25.64■■□□□ 1.7
U2AF1-204ENST00000459639 PTPRSQ13332 1948 aa25.64■■□□□ 1.7
U2AF1-204ENST00000459639 LRCH4O75427 683 aa25.64■■□□□ 1.69
U2AF1-204ENST00000459639 PDGFRAP16234 1089 aa25.64■■□□□ 1.69
U2AF1-204ENST00000459639 FLT3P36888 993 aa25.64■■□□□ 1.69
U2AF1-204ENST00000459639 WDR5P61964 334 aaKnown RBP25.64■■□□□ 1.69
U2AF1-204ENST00000459639 MRPL58Q14197 206 aaKnown RBP25.64■■□□□ 1.69
U2AF1-204ENST00000459639 EFHC1Q5JVL4 640 aa25.64■■□□□ 1.69
U2AF1-204ENST00000459639 TRNP1Q6NT89 227 aa25.64■■□□□ 1.69
U2AF1-204ENST00000459639 POLNQ7Z5Q5 900 aa25.64■■□□□ 1.69
U2AF1-204ENST00000459639 DCP1BQ8IZD4 617 aaKnown RBP25.64■■□□□ 1.69
U2AF1-204ENST00000459639 CWH43Q9H720 699 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms