RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 MCF2L2Q86YR7 1114 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 HS6ST3Q8IZP7 471 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 FAM81AQ8TBF8 368 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 PYROXD1Q8WU10 500 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 SCG3Q8WXD2 468 aaKnown RBP8.9□□□□□ -0.98
VPS50-208ENST00000458707 PTPRN2Q92932 1015 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 KCNK17Q96T54 332 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 FAM213AQ9BRX8 229 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 WDR83Q9BRX9 315 aaKnown RBP8.9□□□□□ -0.98
VPS50-208ENST00000458707 PDLIM7Q9NR12 457 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 KLHL11Q9NVR0 708 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 CNTN3Q9P232 1028 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 WDR35Q9P2L0 1181 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 ARHGAP28Q9P2N2 729 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 DCTN4Q9UJW0 460 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 STYXL1Q9Y6J8 313 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 IVNS1ABPQ9Y6Y0 642 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 RLFQ13129 1914 aa8.9□□□□□ -0.99
VPS50-208ENST00000458707 CFAP69A5D8W1 941 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 C3orf70A6NLC5 250 aaPredicted RBP8.89□□□□□ -0.99
VPS50-208ENST00000458707 EIF4E1BA6NMX2 242 aaKnown RBP8.89□□□□□ -0.99
VPS50-208ENST00000458707 NFIBO00712 420 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 CAPN9O14815 690 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 GYG2O15488 501 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 MAGEC1O60732 1142 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 BANF1O75531 89 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 KRT36O76013 467 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 STBD1O95210 358 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 CALB1P05937 261 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 RARBP10826 455 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 GNAT1P11488 350 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 ZNF24P17028 368 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 TBXAS1P24557 533 aaPredicted RBP8.89□□□□□ -0.99
VPS50-208ENST00000458707 SERPINB3P29508 390 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 PIK3CAP42336 1068 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 GCLCP48506 637 aaPredicted RBP8.89□□□□□ -0.99
VPS50-208ENST00000458707 ZNF132P52740 706 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 PSMC1P62191 440 aaKnown RBP8.89□□□□□ -0.99
VPS50-208ENST00000458707 TAP1Q03518 808 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 OVGP1Q12889 678 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 PIGHQ14442 188 aaPredicted RBP8.89□□□□□ -0.99
VPS50-208ENST00000458707 KPNB1Q14974 876 aaKnown RBP8.89□□□□□ -0.99
VPS50-208ENST00000458707 EFTUD2Q15029 972 aaKnown RBP eCLIP8.89□□□□□ -0.99
VPS50-208ENST00000458707 SEPT7Q16181 437 aaKnown RBP8.89□□□□□ -0.99
VPS50-208ENST00000458707 DBN1Q16643 649 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 GSTA3Q16772 222 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 MSS51Q4VC12 460 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 PPP1R15BQ5SWA1 713 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 FNBP1LQ5T0N5 605 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 CAPN12Q6ZSI9 719 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 POLNQ7Z5Q5 900 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 ANKMY2Q8IV38 441 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 PASD1Q8IV76 773 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 UBR7Q8N806 425 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 MIPOL1Q8TD10 442 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 CPT1BQ92523 772 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 GATA6Q92908 595 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 PRMT6Q96LA8 375 aaPredicted RBP8.89□□□□□ -0.99
VPS50-208ENST00000458707 AGBL1Q96MI9 1066 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 TMEM121Q9BTD3 319 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 TMEM120AQ9BXJ8 343 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 APOBEC3GQ9HC16 384 aaKnown RBP8.89□□□□□ -0.99
VPS50-208ENST00000458707 FBXO28Q9NVF7 368 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 DDX43Q9NXZ2 648 aaKnown RBP8.89□□□□□ -0.99
VPS50-208ENST00000458707 TAS2R1Q9NYW7 299 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 DLGAP2Q9P1A6 1054 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 SLC17A7Q9P2U7 560 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 SCOCQ9UIL1 159 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 CCPG1Q9ULG6 757 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 ZNRF3Q9ULT6 936 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 PCDHB4Q9Y5E5 795 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 SCN4AP35499 1836 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 LCTP09848 1927 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 UTRNP46939 3433 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 A0A0G2JND7 137 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 F8W8V4 182 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 H0YCG3 227 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 SGK1O00141 431 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 ATP9AO75110 1047 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 UPP2O95045 317 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 FAM200BP0CF97 657 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 RFC5P40937 340 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 TRPC1P48995 793 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 WNT7BP56706 349 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 LAMB3Q13751 1172 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 RCN2Q14257 317 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 PGM5Q15124 567 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 TAZQ16635 292 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 SLC27A3Q5K4L6 730 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 ANKRD22Q5VYY1 191 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 SMYD5Q6GMV2 418 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 SPOPLQ6IQ16 392 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 MTHFD1LQ6UB35 978 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 TMEM270Q6UE05 265 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 C3orf62Q6ZUJ4 267 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 LRRC6Q86X45 466 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 IQCF2Q8IXL9 164 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 MCPH1Q8NEM0 835 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 SYTL5Q8TDW5 730 aaPredicted RBP8.89□□□□□ -0.99
VPS50-208ENST00000458707 UCMAQ8WVF2 138 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms