RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 CSRP1P21291 193 aaKnown RBP11.15□□□□□ -0.62
HDLBP-227ENST00000458564 WARSP23381 471 aaKnown RBP11.15□□□□□ -0.62
HDLBP-227ENST00000458564 GBP1P32455 592 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 EIF2DP41214 584 aaKnown RBP11.15□□□□□ -0.62
HDLBP-227ENST00000458564 NOVA1P51513 510 aaKnown RBP11.15□□□□□ -0.62
HDLBP-227ENST00000458564 MRPS21P82921 87 aaKnown RBP11.15□□□□□ -0.62
HDLBP-227ENST00000458564 PSMD2Q13200 908 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 CRY1Q16526 586 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 HSF5Q4G112 596 aaPredicted RBP11.15□□□□□ -0.62
HDLBP-227ENST00000458564 RRAGBQ5VZM2 374 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 CCDC73Q6ZRK6 1079 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 SYCP3Q8IZU3 236 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 GPD1LQ8N335 351 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 MDGA1Q8NFP4 955 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 OLIG1Q8TAK6 271 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 HPDLQ96IR7 371 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 ANKRD36BP1Q96IX9 119 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 FGFBP2Q9BYJ0 223 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 CRTAC1Q9NQ79 661 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 TRPM5Q9NZQ8 1165 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 MAGEC2Q9UBF1 373 aaPredicted RBP11.15□□□□□ -0.62
HDLBP-227ENST00000458564 EVLQ9UI08 416 aaPredicted RBP11.15□□□□□ -0.62
HDLBP-227ENST00000458564 CLIC4Q9Y696 253 aa11.15□□□□□ -0.62
HDLBP-227ENST00000458564 ABCA7Q8IZY2 2146 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 ZNF840PA6NDX5 716 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 LEFTY2O00292 366 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 CDX4O14627 284 aaPredicted RBP11.14□□□□□ -0.63
HDLBP-227ENST00000458564 SLC9A3R1O14745 358 aaPredicted RBP11.14□□□□□ -0.63
HDLBP-227ENST00000458564 TRIM66O15016 1216 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 KHNYNO15037 678 aaKnown RBP11.14□□□□□ -0.63
HDLBP-227ENST00000458564 ATP2C2O75185 946 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 OAS1P00973 400 aaKnown RBP11.14□□□□□ -0.63
HDLBP-227ENST00000458564 CYP17A1P05093 508 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 CEACAM1P13688 526 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 IDEP14735 1019 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 BCKDHBP21953 392 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 BDNFP23560 247 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 LMO2P25791 158 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 USP46P62068 366 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 PSMC1P62191 440 aaKnown RBP11.14□□□□□ -0.63
HDLBP-227ENST00000458564 SURF1Q15526 300 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 C2orf27AQ580R0 203 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 ANO7Q6IWH7 933 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 CYP2U1Q7Z449 544 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 WDR49Q8IV35 697 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 TTC16Q8NEE8 873 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 OR5B17Q8NGF7 314 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 MYCBPAPQ8TBZ2 947 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 PCED1BQ96HM7 432 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 C8orf48Q96LL4 319 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 TPSD1Q9BZJ3 242 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 TMEM9BQ9NQ34 198 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 R3HCC1Q9Y3T6 440 aaKnown RBP11.14□□□□□ -0.63
HDLBP-227ENST00000458564 CACNA1GO43497 2377 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 NUP205Q92621 2012 aa11.14□□□□□ -0.63
HDLBP-227ENST00000458564 PTPRDP23468 1912 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 A0A0A0MRY4 1105 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 ZNF233A6NK53 670 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 GIPC1O14908 333 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 TACC1O75410 805 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 ALDH1A2O94788 518 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 TNNC2P02585 160 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 FAM163BP0C2L3 166 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 PDCP20941 246 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 ANXA13P27216 316 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 GRIK1P39086 918 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 P2RY2P41231 377 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 ZNF252P-AS1Q0IIN9 211 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 DHCR24Q15392 516 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 DUOXA2Q1HG44 320 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 SPDYCQ5MJ68 293 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 SH3PXD2AQ5TCZ1 1133 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 LMBRD2Q68DH5 695 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-227ENST00000458564 UNQ6494/PRO21346Q6UXR6 183 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 FILIP1Q7Z7B0 1213 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 CBWD2Q8IUF1 395 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 ADGRG2Q8IZP9 1017 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 IL17RCQ8NAC3 791 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 KDF1Q8NAX2 398 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-227ENST00000458564 CLIC6Q96NY7 704 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 DUSP9Q99956 384 aaKnown RBP11.13□□□□□ -0.63
HDLBP-227ENST00000458564 TMEM121BQ9BXQ6 578 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-227ENST00000458564 PCIF1Q9H4Z3 704 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 KIAA1586Q9HCI6 787 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 PANK4Q9NVE7 773 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 CPQQ9Y646 472 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 ZFYVE26Q68DK2 2539 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 FREM2Q5SZK8 3169 aa11.13□□□□□ -0.63
HDLBP-227ENST00000458564 A0A087X0B3 334 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 VPS37CA5D8V6 355 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-227ENST00000458564 TMEM8BA6NDV4 472 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 PATE3B3GLJ2 98 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 F8VP50 259 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 TNFRSF10BO14763 440 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 PRPF6O94906 941 aaKnown RBP11.12□□□□□ -0.63
HDLBP-227ENST00000458564 ADH1CP00326 375 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 HNRNPLP14866 589 aaKnown RBP eCLIP11.12□□□□□ -0.63
HDLBP-227ENST00000458564 HOXD12P35452 270 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 STAT6P42226 847 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 DPP6P42658 865 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms