RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
CPSF6-203ENST00000456847 GTF2H1P32780 548 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 CACNA2D1P54289 1103 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 FKBP3Q00688 224 aaKnown RBP17.25■□□□□ 0.35
CPSF6-203ENST00000456847 LRRC63Q05C16 580 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 USP13Q92995 863 aaPredicted RBP17.25■□□□□ 0.35
CPSF6-203ENST00000456847 LRRC3BQ96PB8 259 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 NIF3L1Q9GZT8 377 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 SPATA6Q9NWH7 488 aaPredicted RBP17.25■□□□□ 0.35
CPSF6-203ENST00000456847 TRPM5Q9NZQ8 1165 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 CCL26Q9Y258 94 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 ARNTLO00327 626 aa17.24■□□□□ 0.35
CPSF6-203ENST00000456847 USP17L7P0C7H9 530 aa17.24■□□□□ 0.35
CPSF6-203ENST00000456847 GLULP15104 373 aa17.24■□□□□ 0.35
CPSF6-203ENST00000456847 PPP1R2P41236 205 aa17.24■□□□□ 0.35
CPSF6-203ENST00000456847 MAGEA9P43362 315 aa17.24■□□□□ 0.35
CPSF6-203ENST00000456847 PMS1P54277 932 aaKnown RBP17.24■□□□□ 0.35
CPSF6-203ENST00000456847 USP46P62068 366 aa17.24■□□□□ 0.35
CPSF6-203ENST00000456847 KLHL10Q6JEL2 608 aa17.24■□□□□ 0.35
CPSF6-203ENST00000456847 CC2D1AQ6P1N0 951 aaPredicted RBP17.24■□□□□ 0.35
CPSF6-203ENST00000456847 UNC93AQ86WB7 457 aa17.24■□□□□ 0.35
CPSF6-203ENST00000456847 SMARCD1Q96GM5 515 aa17.24■□□□□ 0.35
CPSF6-203ENST00000456847 MSANTD3Q96H12 275 aa17.24■□□□□ 0.35
CPSF6-203ENST00000456847 HMGXB4Q9UGU5 601 aa17.24■□□□□ 0.35
CPSF6-203ENST00000456847 MYO16Q9Y6X6 1858 aa17.24■□□□□ 0.35
CPSF6-203ENST00000456847 BIN1O00499 593 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 CCDC130P13994 396 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 CCNE1P24864 410 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 DNAI2Q9GZS0 605 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 C8orf33Q9H7E9 229 aaPredicted RBP17.23■□□□□ 0.35
CPSF6-203ENST00000456847 APOBEC3GQ9HC16 384 aaKnown RBP17.23■□□□□ 0.35
CPSF6-203ENST00000456847 DMAP1Q9NPF5 467 aaPredicted RBP17.23■□□□□ 0.35
CPSF6-203ENST00000456847 KRT82Q9NSB4 513 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 FAM49BQ9NUQ9 324 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 AP1G2O75843 785 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 ABL1P00519 1130 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 CD58P19256 250 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 SOX9P48436 509 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 PDE6CP51160 858 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 ZNF268Q14587 947 aaPredicted RBP17.23■□□□□ 0.35
CPSF6-203ENST00000456847 C1orf210Q8IVY1 113 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 ARL14EPQ8N8R7 260 aaPredicted RBP17.23■□□□□ 0.35
CPSF6-203ENST00000456847 FBXL13Q8NEE6 735 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 DHTKD1Q96HY7 919 aaPredicted RBP17.23■□□□□ 0.35
CPSF6-203ENST00000456847 SLITRK1Q96PX8 696 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 TTLL2Q9BWV7 592 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 CYP3A43Q9HB55 503 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 TMEM30AQ9NV96 361 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 GTSE1Q9NYZ3 720 aa17.23■□□□□ 0.35
CPSF6-203ENST00000456847 C2orf78A6NCI8 922 aa17.22■□□□□ 0.35
CPSF6-203ENST00000456847 UBE2HP62256 183 aa17.22■□□□□ 0.35
CPSF6-203ENST00000456847 TNK2Q07912 1038 aa17.22■□□□□ 0.35
CPSF6-203ENST00000456847 C1orf228Q6PIY5 440 aa17.22■□□□□ 0.35
CPSF6-203ENST00000456847 ZC3H3Q8IXZ2 948 aaKnown RBP17.22■□□□□ 0.35
CPSF6-203ENST00000456847 NUP93Q8N1F7 819 aa17.22■□□□□ 0.35
CPSF6-203ENST00000456847 SLC2A14Q8TDB8 520 aa17.22■□□□□ 0.35
CPSF6-203ENST00000456847 CYP2S1Q96SQ9 504 aa17.22■□□□□ 0.35
CPSF6-203ENST00000456847 GKN1Q9NS71 199 aa17.22■□□□□ 0.35
CPSF6-203ENST00000456847 ARMCX3Q9UH62 379 aaPredicted RBP17.22■□□□□ 0.35
CPSF6-203ENST00000456847 CTNND2Q9UQB3 1225 aa17.22■□□□□ 0.35
CPSF6-203ENST00000456847 SPECC1L-ADORA2AF8WAN1 911 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 LAMTOR5O43504 91 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 RTN3O95197 1032 aaPredicted RBP17.21■□□□□ 0.35
CPSF6-203ENST00000456847 CD44P16070 742 aaKnown RBP17.21■□□□□ 0.35
CPSF6-203ENST00000456847 ADORA2BP29275 332 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 INCA1Q0VD86 236 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 TAF10Q12962 218 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 MTF1Q14872 753 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 ITPRIPL2Q3MIP1 535 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 CCDC40Q4G0X9 1142 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 WDR44Q5JSH3 913 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 FUKQ8N0W3 1084 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 FBXO32Q969P5 355 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 SLC22A12Q96S37 553 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 KCNK16Q96T55 309 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 NT5C1AQ9BXI3 368 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 RAB20Q9NX57 234 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 SHISA7A6NL88 538 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 HDCP19113 662 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 YWHAQP27348 245 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 PPP3CCP48454 512 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 MLLT6P55198 1093 aaPredicted RBP17.21■□□□□ 0.35
CPSF6-203ENST00000456847 FRMD5Q7Z6J6 570 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 RALGPS2Q86X27 583 aaPredicted RBP17.21■□□□□ 0.35
CPSF6-203ENST00000456847 CRYBG2Q8N1P7 616 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 NELFBQ8WX92 580 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 SEMA4DQ92854 862 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 CLDN23Q96B33 292 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 GCNT4Q9P109 453 aa17.21■□□□□ 0.35
CPSF6-203ENST00000456847 WDFY4Q6ZS81 3184 aa17.21■□□□□ 0.34
CPSF6-203ENST00000456847 BICDL2A1A5D9 508 aa17.2■□□□□ 0.34
CPSF6-203ENST00000456847 CTHP32929 405 aa17.2■□□□□ 0.34
CPSF6-203ENST00000456847 RPS9P46781 194 aaKnown RBP17.2■□□□□ 0.34
CPSF6-203ENST00000456847 IFNAR2P48551 515 aa17.2■□□□□ 0.34
CPSF6-203ENST00000456847 SLC5A3P53794 718 aa17.2■□□□□ 0.34
CPSF6-203ENST00000456847 USP4Q13107 963 aa17.2■□□□□ 0.34
CPSF6-203ENST00000456847 MORC3Q14149 939 aa17.2■□□□□ 0.34
CPSF6-203ENST00000456847 TRIM68Q6AZZ1 485 aa17.2■□□□□ 0.34
CPSF6-203ENST00000456847 PAQR9Q6ZVX9 377 aa17.2■□□□□ 0.34
CPSF6-203ENST00000456847 C12orf29Q8N999 325 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms