RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 CGRRF1Q99675 332 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 ABCB6Q9NP58 842 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 DLL3Q9NYJ7 618 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 MAPK8IP1Q9UQF2 711 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 WNT6Q9Y6F9 365 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.81□□□□□ -0.2
TREX1-203ENST00000456089 NR3C1P04150 777 aa13.8□□□□□ -0.2
TREX1-203ENST00000456089 CKMP06732 381 aa13.8□□□□□ -0.2
TREX1-203ENST00000456089 RPL13P26373 211 aaKnown RBP13.8□□□□□ -0.2
TREX1-203ENST00000456089 CASP4P49662 377 aa13.8□□□□□ -0.2
TREX1-203ENST00000456089 AP3M2P53677 418 aa13.8□□□□□ -0.2
TREX1-203ENST00000456089 BIRC3Q13489 604 aa13.8□□□□□ -0.2
TREX1-203ENST00000456089 PNOCQ13519 176 aa13.8□□□□□ -0.2
TREX1-203ENST00000456089 CFAP221Q4G0U5 840 aa13.8□□□□□ -0.2
TREX1-203ENST00000456089 TMEM196Q5HYL7 178 aa13.8□□□□□ -0.2
TREX1-203ENST00000456089 MDH1BQ5I0G3 518 aa13.8□□□□□ -0.2
TREX1-203ENST00000456089 CC2D1AQ6P1N0 951 aaPredicted RBP13.8□□□□□ -0.2
TREX1-203ENST00000456089 FAM171BQ6P995 826 aa13.8□□□□□ -0.2
TREX1-203ENST00000456089 C1orf228Q6PIY5 440 aa13.8□□□□□ -0.2
TREX1-203ENST00000456089 LIMS2Q7Z4I7 341 aa13.8□□□□□ -0.2
TREX1-203ENST00000456089 FMR1NBQ8N0W7 255 aaPredicted RBP13.8□□□□□ -0.2
TREX1-203ENST00000456089 ZNF516Q92618 1163 aa13.8□□□□□ -0.2
TREX1-203ENST00000456089 TRMT2BQ96GJ1 504 aaKnown RBP13.8□□□□□ -0.2
TREX1-203ENST00000456089 GZF1Q9H116 711 aaPredicted RBP13.8□□□□□ -0.2
TREX1-203ENST00000456089 DPEP3Q9H4B8 488 aa13.8□□□□□ -0.2
TREX1-203ENST00000456089 MAGEC2Q9UBF1 373 aaPredicted RBP13.8□□□□□ -0.2
TREX1-203ENST00000456089 UXTQ9UBK9 157 aaPredicted RBP13.8□□□□□ -0.2
TREX1-203ENST00000456089 TRAV19A0A0A6YYK7 116 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 DCDC2BA2VCK2 349 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 ANTXRLA6NF34 631 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 SCAMP3O14828 347 aaKnown RBP13.79□□□□□ -0.2
TREX1-203ENST00000456089 RNF40O75150 1001 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 USP17L7P0C7H9 530 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 WARSP23381 471 aaKnown RBP13.79□□□□□ -0.2
TREX1-203ENST00000456089 GRIK1P39086 918 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 GALK1P51570 392 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 ATXN1P54253 815 aaKnown RBP13.79□□□□□ -0.2
TREX1-203ENST00000456089 CACNA2D1P54289 1103 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 TNNC1P63316 161 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 MTF1Q14872 753 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 ZNF77Q15935 545 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 CCDC6Q16204 474 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 LAIR1Q6GTX8 287 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.79□□□□□ -0.2
TREX1-203ENST00000456089 LONP2Q86WA8 852 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 SLC9A9Q8IVB4 645 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 SPATA18Q8TC71 538 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 PLEKHO2Q8TD55 490 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 SMARCE1Q969G3 411 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 PCED1BQ96HM7 432 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 MYRFLQ96LU7 910 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 GTPBP4Q9BZE4 634 aaKnown RBP13.79□□□□□ -0.2
TREX1-203ENST00000456089 LINC00597Q9H2U6 94 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 KCTD10Q9H3F6 313 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 KIF9Q9HAQ2 790 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 TMEM30AQ9NV96 361 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 DUS2Q9NX74 493 aaKnown RBP13.79□□□□□ -0.2
TREX1-203ENST00000456089 CHMP5Q9NZZ3 219 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 GCNT4Q9P109 453 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 CDH9Q9ULB4 789 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 SPTBN2O15020 2390 aa13.79□□□□□ -0.2
TREX1-203ENST00000456089 CLDN5O00501 218 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 PAPSS2O95340 614 aaPredicted RBP13.78□□□□□ -0.2
TREX1-203ENST00000456089 KRT13P13646 458 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 GJA4P35212 333 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 MAGEA11P43364 429 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 IFNAR2P48551 515 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 MYL6P60660 151 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 ZXDBP98169 803 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 GRSF1Q12849 480 aaKnown RBP eCLIP13.78□□□□□ -0.2
TREX1-203ENST00000456089 IFRD2Q12894 506 aaPredicted RBP13.78□□□□□ -0.2
TREX1-203ENST00000456089 USP4Q13107 963 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 C4orf50Q6ZRC1 276 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 CEP68Q76N32 757 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 DPH6Q7L8W6 267 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 GUF1Q8N442 669 aaKnown RBP13.78□□□□□ -0.2
TREX1-203ENST00000456089 FAM160A2Q8N612 972 aaPredicted RBP13.78□□□□□ -0.2
TREX1-203ENST00000456089 OR6B3Q8NGW1 331 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 SH3RF2Q8TEC5 729 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 EZH1Q92800 747 aaPredicted RBP13.78□□□□□ -0.2
TREX1-203ENST00000456089 FUBP3Q96I24 572 aaKnown RBP eCLIP13.78□□□□□ -0.2
TREX1-203ENST00000456089 TIGD1Q96MW7 591 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 GSDMAQ96QA5 445 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 SNX25Q9H3E2 840 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 ECT2Q9H8V3 914 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 NXF1Q9UBU9 619 aaKnown RBP13.78□□□□□ -0.2
TREX1-203ENST00000456089 ZMYM5Q9UJ78 669 aa13.78□□□□□ -0.2
TREX1-203ENST00000456089 CDV3Q9UKY7 258 aaKnown RBP13.78□□□□□ -0.2
TREX1-203ENST00000456089 F8VP50 259 aa13.77□□□□□ -0.21
TREX1-203ENST00000456089 TRDMT1O14717 391 aaKnown RBP13.77□□□□□ -0.21
TREX1-203ENST00000456089 GDF9O60383 454 aa13.77□□□□□ -0.21
TREX1-203ENST00000456089 ABL1P00519 1130 aa13.77□□□□□ -0.21
TREX1-203ENST00000456089 HDCP19113 662 aa13.77□□□□□ -0.21
TREX1-203ENST00000456089 NR2F2P24468 414 aa13.77□□□□□ -0.21
TREX1-203ENST00000456089 GNL1P36915 607 aaPredicted RBP13.77□□□□□ -0.21
TREX1-203ENST00000456089 RAP1GAPP47736 663 aa13.77□□□□□ -0.21
TREX1-203ENST00000456089 CDH8P55286 799 aa13.77□□□□□ -0.21
TREX1-203ENST00000456089 STIM1Q13586 685 aa13.77□□□□□ -0.21
TREX1-203ENST00000456089 ZNF268Q14587 947 aaPredicted RBP13.77□□□□□ -0.21
TREX1-203ENST00000456089 EML3Q32P44 896 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms