RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 SEMA6DQ8NFY4 1073 aa4.5□□□□□ -1.69
R3HDM1-212ENST00000456040 XAGE5Q8WWM1 108 aa4.5□□□□□ -1.69
R3HDM1-212ENST00000456040 WASF1Q92558 559 aa4.5□□□□□ -1.69
R3HDM1-212ENST00000456040 R3HDM4Q96D70 268 aa4.5□□□□□ -1.69
R3HDM1-212ENST00000456040 ZNF518BQ9C0D4 1074 aa4.5□□□□□ -1.69
R3HDM1-212ENST00000456040 SMURF2Q9HAU4 748 aa4.5□□□□□ -1.69
R3HDM1-212ENST00000456040 A1CFQ9NQ94 594 aaKnown RBP4.5□□□□□ -1.69
R3HDM1-212ENST00000456040 TRMT13Q9NUP7 481 aaKnown RBP4.5□□□□□ -1.69
R3HDM1-212ENST00000456040 SH3BP4Q9P0V3 963 aa4.5□□□□□ -1.69
R3HDM1-212ENST00000456040 L1RE1Q9UN81 338 aa4.5□□□□□ -1.69
R3HDM1-212ENST00000456040 CFAP69A5D8W1 941 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 GOLGA6CA6NDK9 693 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 GOLGA6BA6NDN3 693 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 WIPF3A6NGB9 483 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 LINC01548A6NM66 108 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 MYO1FO00160 1098 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 CSF1RP07333 972 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 DLDP09622 509 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 NPSP0C0P6 89 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 GOLGA6DP0CG33 693 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 ENGP17813 658 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 KCNA3P22001 575 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 PTGER1P34995 402 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 PRKAG1P54619 331 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 TPTEP56180 551 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 MLC1Q15049 377 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 LLGL1Q15334 1064 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 CNN3Q15417 329 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 TBC1D25Q3MII6 688 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 ZIK1Q3SY52 487 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 MTHFD1LQ6UB35 978 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 COL23A1Q86Y22 540 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 BPIFB1Q8TDL5 484 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 SOCS4Q8WXH5 440 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 RAPGEF4Q8WZA2 1011 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 DPF1Q92782 380 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 PPP2R3CQ969Q6 453 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 FSD1LQ9BXM9 530 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 C22orf23Q9BZE7 217 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 GOLGA6AQ9NYA3 693 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 SERGEFQ9UGK8 458 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 TPCN1Q9ULQ1 816 aa4.49□□□□□ -1.69
R3HDM1-212ENST00000456040 ISM1B1AKI9 464 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 ZNF213O14771 459 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 TBX3O15119 743 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 KCNAB3O43448 404 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 FRS3O43559 492 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 TSPAN6O43657 245 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 TJP3O95049 919 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 PRKCBP05771 671 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 ADORA2AP29274 412 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 CACNB3P54284 484 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 SUMO3P55854 103 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 TFF2Q03403 129 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 GRM1Q13255 1194 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 TMEM119Q4V9L6 283 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 SWSAP1Q6NVH7 229 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 Q6ZWC4 215 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 IZUMO1Q8IYV9 350 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 SPARTQ8N0X7 666 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 ABRAQ8N0Z2 381 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 MYO1HQ8N1T3 1032 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 ABHD11Q8NFV4 315 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 ZBTB9Q96C00 473 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 REPS1Q96D71 796 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 DPCDQ9BVM2 203 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 FLRT1Q9NZU1 646 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 G3BP2Q9UN86 482 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 ADAMTS5Q9UNA0 930 aa4.48□□□□□ -1.69
R3HDM1-212ENST00000456040 USP19O94966 1318 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 CGB1A6NKQ9 187 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 TMEM233B4DJY2 109 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 BRAFP15056 766 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 HOXA4Q00056 320 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 INSCQ1MX18 579 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 CERCAMQ5T4B2 595 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 DCAF12L1Q5VU92 463 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 APOA5Q6Q788 366 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 NAPRTQ6XQN6 538 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 SRGAP1Q7Z6B7 1085 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 CAND1Q86VP6 1230 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 DDB2Q92466 427 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 MAML1Q92585 1016 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 SPSB4Q96A44 273 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 FCRL4Q96PJ5 515 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 PPP1R9BQ96SB3 815 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 XPNPEP3Q9NQH7 507 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 SACM1LQ9NTJ5 587 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 CPNE7Q9UBL6 633 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 GABRQQ9UN88 632 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 SNX14Q9Y5W7 946 aa4.47□□□□□ -1.69
R3HDM1-212ENST00000456040 FNDC1Q4ZHG4 1894 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-212ENST00000456040 TRIM43BA6NCK2 446 aa4.46□□□□□ -1.7
R3HDM1-212ENST00000456040 MBD3L4A6NDZ8 208 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-212ENST00000456040 MBD3L3A6NE82 208 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-212ENST00000456040 SMIM22K7EJ46 135 aa4.46□□□□□ -1.7
R3HDM1-212ENST00000456040 PSMD9O00233 223 aa4.46□□□□□ -1.7
R3HDM1-212ENST00000456040 IGKV2-30P06310 120 aa4.46□□□□□ -1.7
R3HDM1-212ENST00000456040 CELA2AP08217 269 aa4.46□□□□□ -1.7
R3HDM1-212ENST00000456040 HMGB1P09429 215 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms