RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 MICAL3Q7RTP6 2002 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 OR6C75A6NL08 312 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 DAB1O75553 588 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 F9P00740 461 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 CTSHP09668 335 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 PYGMP11217 842 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 CCL5P13501 91 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 MAGEA11P43364 429 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 GUCY2FP51841 1108 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 TSPY1Q01534 308 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 DR1Q01658 176 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 NFE2Q16621 373 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 OLFML1Q6UWY5 402 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 CTU1Q7Z7A3 348 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 DCP1BQ8IZD4 617 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 NKD2Q969F2 451 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 PGAP3Q96FM1 320 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 MS4A14Q96JA4 679 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 PNKPQ96T60 521 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 KRT12Q99456 494 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 SYT15Q9BQS2 421 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 ERP44Q9BS26 406 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 OSBPL8Q9BZF1 889 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 KLK14Q9P0G3 267 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 WHRNQ9P202 907 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 PACSIN2Q9UNF0 486 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 RAD54BQ9Y620 910 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 A6NNZ2 444 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 TMEM110-MUSTN1A8MSY1 372 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 SPTLC1O15269 473 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 HEXIM1O94992 359 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 CFHP08603 1231 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 ITIH2P19823 946 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 SDC4P31431 198 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 CYP2C18P33260 490 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 RFC1P35251 1148 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 COILP38432 576 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 VSNL1P62760 191 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 SLC25A11Q02978 314 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 TUBB8Q3ZCM7 444 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 RAB41Q5JT25 222 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 GLRA4Q5JXX5 417 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 CFAP58Q5T655 872 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 FAM102AQ5T9C2 384 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 DUPD1Q68J44 220 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 VSTM1Q6UX27 236 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 BZW1Q7L1Q6 419 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 TTC30AQ86WT1 665 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 GPIHBP1Q8IV16 184 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 CCDC89Q8N998 374 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 KRT35Q92764 455 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 MAGOHBQ96A72 148 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 FAM84AQ96KN4 292 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 FAM193BQ96PV7 902 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 C11orf84Q9BUA3 381 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 DDX23Q9BUQ8 820 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 FUT8Q9BYC5 575 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 TRPV6Q9H1D0 765 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 DDX43Q9NXZ2 648 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 HMGXB4Q9UGU5 601 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 CYTH4Q9UIA0 394 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 STAP1Q9ULZ2 295 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 PCDHB7Q9Y5E2 793 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 SF3B1O75533 1304 aaKnown RBP eCLIP7.17□□□□□ -1.268e-6■■■■■ 107
ECHDC1-210ENST00000454859 FNDC1Q4ZHG4 1894 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 NLRC5Q86WI3 1866 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 CFAP69A5D8W1 941 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 H7C4K7 107 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 ATMINO43313 823 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 MGEA5O60502 916 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 ECEL1O95672 775 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 ITGAVP06756 1048 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 PDGFRAP16234 1089 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 NOS2P35228 1153 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 MATKP42679 507 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 SCNN1GP51170 649 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 RPL7AP62424 266 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 PDE4CQ08493 712 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 SIX1Q15475 284 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 INTS6LQ5JSJ4 861 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 OR6B2Q6IFH4 312 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 SLC39A5Q6ZMH5 540 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 SPOCD1Q6ZMY3 1216 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 BBS12Q6ZW61 710 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 BNIPLQ7Z465 357 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 PCGF5Q86SE9 256 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 COLGALT2Q8IYK4 626 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 ABI1Q8IZP0 508 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 FUKQ8N0W3 1084 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 KRT222Q8N1A0 295 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 ARHGAP18Q8N392 663 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 PRELID2Q8N945 189 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 NT5C3BQ969T7 300 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 SLITRK1Q96PX8 696 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 ZNF670Q9BS34 389 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 UNC93B1Q9H1C4 597 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 RETREG1Q9H6L5 497 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 LRRC4Q9HBW1 653 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 EHD2Q9NZN4 543 aa7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 MTRF1LQ9UGC7 380 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms