RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 CCDC89Q8N998 374 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 NSUN7Q8NE18 718 aaKnown RBP4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 IL17REQ8NFR9 667 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 OTUD7AQ8TE49 926 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 SMCR8Q8TEV9 937 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 STYXQ8WUJ0 223 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 TBATAQ96M53 351 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 FAM227BQ96M60 508 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 NEUROD6Q96NK8 337 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 NAP1L5Q96NT1 182 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 DCLRE1CQ96SD1 692 aaKnown RBP4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 PTDSS2Q9BVG9 487 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 KATNAL1Q9BW62 490 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 SLC46A2Q9BY10 475 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 KRTAP3-1Q9BYR8 98 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 TRIM5Q9C035 493 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 PCDHAC1Q9H158 963 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 SMOC2Q9H3U7 446 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 ZBTB26Q9HCK0 441 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 ITM2CQ9NQX7 267 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 C9orf78Q9NZ63 289 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 LRFN1Q9P244 771 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 FBXO2Q9UK22 296 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 ZMYND8Q9ULU4 1186 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 SCAF8Q9UPN6 1271 aaKnown RBP4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 DTNAQ9Y4J8 743 aa4.4□□□□□ -1.71
HMGB1P15-201ENST00000453854 MRC2Q9UBG0 1479 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 CAPN14A8MX76 684 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 TRIM38O00635 465 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 TCERG1O14776 1098 aaKnown RBP4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 ZNF185O15231 689 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 CYP27B1O15528 508 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 TNFRSF6BO95407 300 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 NTSR2O95665 410 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 ITGB3P05106 788 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 ELANEP08246 267 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 NPPBP16860 134 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 COMTP21964 271 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 PPIFP30405 207 aaKnown RBP4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 ATICP31939 592 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 PXNP49023 591 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 MAN2A2P49641 1150 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 SCNN1GP51170 649 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 POLE2P56282 527 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 LILRA4P59901 499 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 HHEXQ03014 270 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 MYO1EQ12965 1108 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 DYRK1AQ13627 763 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 SIM2Q14190 667 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 PUM1Q14671 1186 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 HYIQ5T013 277 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 FAXCQ5TGI0 409 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 MANEALQ5VSG8 457 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 SLC30A10Q6XR72 485 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 SGMS1Q86VZ5 419 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 SUGP1Q8IWZ8 645 aaKnown RBP4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 FAM109AQ8N4B1 249 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 PPHLN1Q8NEY8 458 aaKnown RBP4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 Q8TCH9 128 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 BPIFB1Q8TDL5 484 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 RSC1A1Q92681 617 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 EDAQ92838 391 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 ZDHHC12Q96GR4 267 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 GPR87Q9BY21 358 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 CXorf36Q9H7Y0 433 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 KCNE5Q9UJ90 142 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 USP15Q9Y4E8 981 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 LRRFIP2Q9Y608 721 aaKnown RBP4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 ZNF536O15090 1300 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 AATKQ6ZMQ8 1374 aa4.39□□□□□ -1.71
HMGB1P15-201ENST00000453854 ZCCHC6Q5VYS8 1495 aaKnown RBP4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 ARAP1Q96P48 1450 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 DCAF1Q9Y4B6 1507 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 PRAMEF33A0A0G2JMD5 474 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 MARCH11A6NNE9 402 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 AHRRA9YTQ3 701 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 TRIM24O15164 1050 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 DHHO43323 396 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 PRAMEF10O60809 474 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 COQ9O75208 318 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 FAM155BO75949 473 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 SRGNP10124 158 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 PECAM1P16284 738 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 CHRM3P20309 590 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 MAGEA10P43363 369 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 PNLIPRP1P54315 467 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 RNASE9P60153 205 aaKnown RBP4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 HSD11B2P80365 405 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 MC2RQ01718 297 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 SATB1Q01826 763 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 NSUN2Q08J23 767 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 KCNAB1Q14722 419 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 HLXQ14774 488 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 PDCD4Q53EL6 469 aaKnown RBP4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 B3GNTL1Q67FW5 361 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 MZT2AQ6P582 158 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 TMEM108Q6UXF1 575 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 MMS22LQ6ZRQ5 1243 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 LIMS2Q7Z4I7 341 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms